ggKbase | organisms

13_1_40CM_2_Myxococcales_68_15

In projects: 13_1_40CM_2 | angelo_ncbi_2016 | meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 14.91 Longest contig: 10.09 Kbp Bin length: 1.27 Mbp GC content: 67.89 %

Contigs count: 465 Features count: 1445 rRNAs count: 0 tRNAs count: 3

Genome completeness

partial RP 24 / 55 MC: 1 BSCG 22 / 51 ASCG 5 / 38 MC: 1

Displaying items 201-250 of 465 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_2_scaffold_101215 Species: Anaeromyxobacter sp. PSR-1 (50%)	2	1895 bp	69.55	15.44	94.51
13_1_40cm_2_scaffold_80616 Species: R_Acidobacteria_67_28 (100%)	2	2116 bp	76.94	13.68	100.10
13_1_40cm_2_scaffold_56294 Species: Cystobacter fuscus (50%)	2	2502 bp	70.34	13.73	99.28
13_1_40cm_2_scaffold_325506 Species: RBG_16_Actinobacteria_68_12_curated (50%)	2	1060 bp	71.23	11.46	88.30
13_1_40cm_2_scaffold_214200 Species: Cystobacter violaceus (50%)	2	1311 bp	67.89	12.93	94.28
13_1_40cm_2_scaffold_390795 Species: R_Gemmatimonadetes_71_11 (50%)	2	1637 bp	70.19	15.27	100.61
13_1_40cm_2_scaffold_318703 Species: Anaeromyxobacter sp. Fw109-5 (50%)	2	2553 bp	65.84	12.66	100.35
13_1_40cm_2_scaffold_258232 Species: Sorangium cellulosum (50%)	2	1917 bp	70.79	14.87	98.90
13_1_40cm_2_scaffold_371782 Species: Sorangium cellulosum (50%)	2	1488 bp	72.78	13.41	84.88
13_1_40cm_2_scaffold_43628 Species: Cystobacter fuscus (50%)	2	4495 bp	57.55	12.00	84.29
13_1_40cm_2_scaffold_152251 Species: Anaeromyxobacter dehalogenans (50%)	2	1547 bp	63.28	11.83	79.51
13_1_40cm_2_scaffold_344978 Species: Sorangium cellulosum (50%)	2	1020 bp	71.47	15.29	90.29
13_1_40cm_2_scaffold_181373 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1421 bp	71.99	14.25	50.67
13_1_40cm_2_scaffold_238160 Species: RBG_19FT_COMBO_Nitrospirae_58_9_curated (50%)	2	1243 bp	64.60	19.67	89.78
13_1_40cm_2_scaffold_116468 Species: Anaeromyxobacter dehalogenans (50%)	2	1769 bp	71.23	12.21	96.66
13_1_40cm_2_scaffold_180916 Species: Hyalangium minutum (50%)	2	1423 bp	67.39	16.13	87.91
13_1_40cm_2_scaffold_356003 Species: Myxococcus stipitatus (50%)	2	1238 bp	65.91	12.61	97.66
13_1_40cm_2_scaffold_170862 Species: Cystobacter fuscus (50%)	2	1463 bp	66.64	17.33	82.64
13_1_40cm_2_scaffold_205026 Species: Chondromyces apiculatus (50%)	2	1339 bp	52.73	12.21	95.44
13_1_40cm_2_scaffold_163514 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1494 bp	71.42	11.85	51.81
13_1_40cm_2_scaffold_199884 Species: Sorangium cellulosum (50%)	2	1357 bp	70.38	11.61	100.15
13_1_40cm_2_scaffold_55187 Species: Stigmatella aurantiaca (50%)	2	2526 bp	67.89	18.17	100.12
13_1_40cm_2_scaffold_33986 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	3141 bp	64.63	18.53	89.40
13_1_40cm_2_scaffold_330917 Species: Anaeromyxobacter sp. Fw109-5 (50%)	2	1050 bp	68.48	14.86	99.43
13_1_40cm_2_scaffold_319775 Species: GWC2_Gemmatimonadetes_71_10_curated (50%)	2	1071 bp	72.46	17.65	90.20
13_1_40cm_2_scaffold_209102 Species: Cystobacter fuscus (50%)	2	1327 bp	67.75	17.63	97.44
13_1_40cm_2_scaffold_103372 Species: R_Nitrospirae_62_14 (50%)	2	2393 bp	62.60	18.22	102.05
13_1_40cm_2_scaffold_98712 Species: Anaeromyxobacter sp. Fw109-5 (50%)	2	1918 bp	59.91	17.99	74.14
13_1_40cm_2_scaffold_103374 Species: Anaeromyxobacter dehalogenans (50%)	2	3445 bp	66.10	15.44	64.62
13_1_40cm_2_scaffold_396980 Species: Anaeromyxobacter dehalogenans (50%)	2	1534 bp	67.47	12.22	71.77
13_1_40cm_2_scaffold_238978 Species: uncultured bacterium (50%)	2	1241 bp	57.70	12.33	94.28
13_1_40cm_2_scaffold_405544 Species: Haliangium ochraceum (50%)	2	1323 bp	60.85	19.53	99.09
13_1_40cm_2_scaffold_123786 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1716 bp	64.34	14.25	97.20
13_1_40cm_2_scaffold_495896 Species: R_Betaproteobacteria_65_24 (50%)	2	1758 bp	69.74	12.19	96.08
13_1_40cm_2_scaffold_430963 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	1514 bp	68.76	13.35	89.76
13_1_40cm_2_scaffold_189195 Species: RBG_13_Deltaproteobacteria_58_19_curated (50%)	2	1393 bp	72.15	13.68	100.14
13_1_40cm_2_scaffold_191167 Species: RLO_Rokubacteria_71_22 (50%)	2	2267 bp	65.46	14.45	70.93
13_1_40cm_2_scaffold_362656 Species: Arthrobacter sp. FB24 (50%)	2	1622 bp	63.01	14.68	100.25
13_1_40cm_2_scaffold_324108 Species: Sorangium cellulosum (100%)	2	1523 bp	73.67	13.79	96.91
13_1_40cm_2_scaffold_62293 Species: RBG_16_Acidobacteria_68_9_curated (50%)	2	2387 bp	67.99	13.26	98.79
13_1_40cm_2_scaffold_231827 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1260 bp	72.70	18.69	100.48
13_1_40cm_2_scaffold_226323 Species: Haliangium ochraceum (50%)	2	1275 bp	73.57	18.35	100.24
13_1_40cm_2_scaffold_349213 Species: Cystobacter fuscus (50%)	2	1011 bp	65.28	13.20	82.49
13_1_40cm_2_scaffold_357306 Species: Stigmatella aurantiaca (50%)	2	1780 bp	64.61	12.39	69.94
13_1_40cm_2_scaffold_596678 Species: Hyalangium minutum (50%)	2	1210 bp	62.40	13.51	84.55
13_1_40cm_2_scaffold_298235 Species: Cystobacter fuscus (50%)	2	1110 bp	67.57	11.89	87.30
13_1_40cm_2_scaffold_183476 Species: Anaeromyxobacter dehalogenans (50%)	2	1414 bp	68.18	14.11	97.81
13_1_40cm_2_scaffold_194514 Species: RBG_16_RIF_WS3X_71_46_curated (100%)	2	1375 bp	70.98	18.00	100.15
13_1_40cm_2_scaffold_436561 Species: Desulfococcus multivorans (50%)	2	1132 bp	70.67	20.14	98.06
13_1_40cm_2_scaffold_479157 Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)	2	1124 bp	73.04	14.15	100.09

Displaying items 201-250 of 465 in total

13_1_40CM_2_Myxococcales_68_15

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_2_Myxococcales_68_15

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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