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13_1_40CM_2_Cyanobacteria_61_4

13_1_40CM_2_Bacteria_61_4

Consensus taxonomy: Bacteria

Description

Just 3 single copy genes.-CB

Displaying items 6251-6300 of 6823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_2_scaffold_311159
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (100%)
1 1086 bp 61.42 2.21 66.30
13_1_40cm_2_scaffold_147477
Species: Microcoleus vaginatus (50%)
2 1571 bp 49.08 3.53 66.26
13_1_40cm_2_scaffold_337248
Species: Candidatus Scalindua brodae (50%)
2 1037 bp 58.53 3.04 66.25
13_1_40cm_2_scaffold_341621
Species: R_RIF_OD1_12_44_230 (100%)
1 1028 bp 54.38 3.79 66.25
13_1_40cm_2_scaffold_186315
Species: Tolypothrix bouteillei (100%)
1 1404 bp 58.05 2.35 66.24
13_1_40cm_2_scaffold_77316
Domain: Bacteria (75%)
4 3977 bp 64.34 4.50 66.23
13_1_40cm_2_scaffold_343116
Species: RLO_RIF_CHLX_71_12 (100%)
1 1024 bp 66.70 2.34 66.21
13_1_40cm_2_scaffold_77399
Species: Cyanothece sp. PCC 7425 (50%)
2 2157 bp 53.59 1.81 66.20
13_1_40cm_2_scaffold_157201
Species: RifOxyA12_full_Proteobacteria_58_15_curated (100%)
1 1523 bp 60.93 6.99 66.19
13_1_40cm_2_scaffold_338765
Species: RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated (100%)
1 1034 bp 50.10 1.45 66.15
13_1_40cm_2_scaffold_250353
Species: Nostoc sp. PCC 7107 (50%)
2 1211 bp 60.36 2.48 66.14
13_1_40cm_2_scaffold_248377
Class: Oscillatoriophycideae (66.67%)
3 1216 bp 52.71 3.70 66.12
13_1_40cm_2_scaffold_259590
Species: Burkholderia fungorum (50%)
2 1189 bp 52.73 1.89 66.11
13_1_40cm_2_scaffold_600638
Species: Microcoleus sp. PCC 7113 (50%)
2 1053 bp 48.81 2.56 66.10
13_1_40cm_2_scaffold_201998
Species: Nostoc sp. PCC 7120 (50%)
2 1349 bp 47.89 1.89 66.05
13_1_40cm_2_scaffold_271406
Species: Leptolyngbya sp. Heron Island J (50%)
2 1163 bp 64.06 3.22 66.04
13_1_40cm_2_scaffold_235719
Species: Oscillatoria nigro-viridis (100%)
1 1250 bp 57.36 3.36 66.00
13_1_40cm_2_scaffold_233766
Species: Cylindrospermum stagnale (100%)
1 1255 bp 65.50 4.90 65.98
13_1_40cm_2_scaffold_293613
Species: Anabaena sp. 90 (100%)
1 1119 bp 51.65 1.61 65.95
13_1_40cm_2_scaffold_243477
Species: RBG_19FT_COMBO_Nitrospirae_58_9_curated (50%)
2 1229 bp 60.94 2.07 65.91
13_1_40cm_2_scaffold_414097
Species: Microcoleus vaginatus (50%)
2 1745 bp 62.52 2.58 65.85
13_1_40cm_2_scaffold_222970
Species: Oscillatoria nigro-viridis (50%)
2 1285 bp 51.75 1.63 65.84
13_1_40cm_2_scaffold_76754
Species: Microcoleus sp. PCC 7113 (50%)
2 2165 bp 54.23 1.59 65.82
13_1_40cm_2_scaffold_348557
Species: Microcoleus sp. PCC 7113 (100%)
1 1012 bp 51.38 1.63 65.81
13_1_40cm_2_scaffold_61179
Species: Calothrix parietina (100%)
1 2407 bp 61.90 5.17 65.81
13_1_40cm_2_scaffold_220899
Species: Gloeobacter kilaueensis (50%)
2 1291 bp 68.71 1.86 65.76
13_1_40cm_2_scaffold_239007
Species: RLO_PLX_64_10 (50%)
2 1241 bp 57.29 2.42 65.75
13_1_40cm_2_scaffold_333192
Species: Gloeocapsa sp. PCC 7428 (50%)
2 1045 bp 69.38 2.30 65.74
13_1_40cm_2_scaffold_135686
Species: Gloeocapsa sp. PCC 7428 (50%)
2 1639 bp 52.90 8.60 65.71
13_1_40cm_2_scaffold_173426
Species: Oscillatoria nigro-viridis (50%)
2 1452 bp 57.99 3.41 65.70
13_1_40cm_2_scaffold_226097
Species: Candidatus Methanoperedens nitroreducens (50%)
2 1276 bp 49.14 2.82 65.60
13_1_40cm_2_scaffold_47621
Domain: Bacteria (100%)
3 2701 bp 52.46 3.11 65.53
13_1_40cm_2_scaffold_318528
Species: R_NC10_66_22 (100%)
1 1073 bp 61.88 1.96 65.42
13_1_40cm_2_scaffold_168627
Species: Gloeobacter violaceus (50%)
2 1472 bp 59.44 1.43 65.42
13_1_40cm_2_scaffold_226399
Species: Kangiella geojedonensis (50%)
2 1275 bp 53.65 1.76 65.41
13_1_40cm_2_scaffold_349544
Species: marine sediment metagenome (100%)
1 1010 bp 56.53 1.49 65.35
13_1_40cm_2_scaffold_384995
Phylum: Cyanobacteria (66.67%)
3 1378 bp 53.27 3.70 65.31
13_1_40cm_2_scaffold_444858
Species: Cyanothece sp. PCC 7425 (100%)
1 1195 bp 66.36 7.28 65.27
13_1_40cm_2_scaffold_237074
Species: Microcoleus sp. PCC 7113 (50%)
2 1246 bp 62.20 1.20 65.25
13_1_40cm_2_scaffold_232042
Species: Leptolyngbya sp. PCC 7375 (100%)
1 1260 bp 60.63 3.57 65.24
13_1_40cm_2_scaffold_252439
Species: RBG_16_Gamma2_64_11_curated (50%)
2 1206 bp 63.85 3.73 65.17
13_1_40cm_2_scaffold_273017
Species: Scytonema millei (100%)
1 1160 bp 65.34 1.81 65.17
13_1_40cm_2_scaffold_539448
Species: Calothrix sp. PCC 7507 (50%)
2 1087 bp 59.15 6.62 65.13
13_1_40cm_2_scaffold_165655
Species: Gloeocapsa sp. PCC 7428 (50%)
2 1485 bp 55.02 1.92 65.05
13_1_40cm_2_scaffold_347321
Species: Nostoc sp. PCC 7524 (50%)
2 1015 bp 61.18 3.69 65.02
13_1_40cm_2_scaffold_63429
Species: Gloeocapsa sp. PCC 7428 (50%)
2 2367 bp 54.71 2.15 65.02
13_1_40cm_2_scaffold_74430
Species: Nostoc sp. PCC 7120 (50%)
2 2197 bp 53.94 2.94 65.00
13_1_40cm_2_scaffold_256629
Species: Microcoleus sp. PCC 7113 (100%)
1 1196 bp 50.33 2.01 64.97
13_1_40cm_2_scaffold_226278
Species: Nostoc punctiforme (50%)
2 1276 bp 64.03 3.53 64.89
13_1_40cm_2_scaffold_274746
Species: R_Rokubacteria_73_56 (50%)
2 1156 bp 56.92 1.82 64.88
Displaying items 6251-6300 of 6823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.