ggKbase home page

13_1_40cm_2_scaffold_266_3

Organism: 13_1_40CM_2_Acidobacteria_56_11

partial RP 24 / 55 MC: 1 BSCG 26 / 51 ASCG 10 / 38
Location: comp(1158..1877)

Top 3 Functional Annotations

Value Algorithm Source
TpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 238.0
  • Bit_score: 289
  • Evalue 6.00e-75
tpiA; triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 238.0
  • Bit_score: 270
  • Evalue 4.40e-70
Triosephosphate isomerase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=TPIS_GEOLS similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 238.0
  • Bit_score: 270
  • Evalue 1.60e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGTTCAAAACGCGCGCCGAGACGCGCGCGTTTTTTGATGCTCTGATTCCCGAGATCCAGAACGTGGAACACTGCGACATCGTCGTCGCTCCGCCATTCACCGCGCTTTCAACTGCTGTTGATGAAACCGATGGTACGCGCGTCGCCATCTCGGCGCAGGATGTACATTGGGAAAAAGAAGGCGCTTTTACCGGCGAAGTTTCCGTCCGGATGCTTGTCGAGGCAGGATGTACCTATACGATCATTGGCCACTCTGAGCGCCGTCAGTATTTCGGGGAGACCGACGAAACCGTCGAAAAGAAGACGCTTGCCTCAGTGGGCGGTGGATTGGAAGCAATCGTATGTGTGGGAGAAACACTCTCGCAACGAGATTCCGGAGGCGCCTTTGATGTGGTGCGCAGACAGATTCGCAACGGCCTGGGCCGGTTGACCGATTCCGCGCTTTCCCATATCATTGTCGCTTACGAGCCTGTATGGGCGATCGGCACCGGGCGCACGGCTACCCCGGAAATCGCTGCCGAAATGCATGCCGAAATCCGAAGGATCTTCGCAGAAATCTACAATCCGGCTGCAGCGGATTCGCTTCGCATTTTGTATGGTGGAAGCGTGAAGCCCGACAATATTACGGCTCTGATGAAAAAAGAGGATATCGATGGTGCGCTGGTCGGCGGTGCGAGTTTAGATCCCGGATCATTCGTAAGCATCATCAAGTATTTATGA
PROTEIN sequence
Length: 240
MFKTRAETRAFFDALIPEIQNVEHCDIVVAPPFTALSTAVDETDGTRVAISAQDVHWEKEGAFTGEVSVRMLVEAGCTYTIIGHSERRQYFGETDETVEKKTLASVGGGLEAIVCVGETLSQRDSGGAFDVVRRQIRNGLGRLTDSALSHIIVAYEPVWAIGTGRTATPEIAAEMHAEIRRIFAEIYNPAAADSLRILYGGSVKPDNITALMKKEDIDGALVGGASLDPGSFVSIIKYL*