ggKbase home page

13_1_40cm_2_scaffold_12597_16

Organism: 13_1_40CM_2_Deltaproteobacteria_68_14

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 14436..15350

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 306.0
  • Bit_score: 252
  • Evalue 6.10e-64
Ribonuclease Z n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0ECA1_THECK similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 312.0
  • Bit_score: 233
  • Evalue 2.70e-58
ribonuclease Z similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 309.0
  • Bit_score: 233
  • Evalue 7.70e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 915
GTGAGGCTGAACCTGATCCCGCTCGGGACCAGCGCCGGGCGGCCGACGCTGCTGCGCGGCGCATCCGCGCTCGCGGTCGTGACGGAGGGAGCTTGGGTGCTCTGCGACTGCGGAGAAGGCGCGCAGATCGCTGCGCTGCGCGCGGGCCTCAGTCTCTCGCGGCTCGACGCCGTCTTGATCACGCACCTGCACGGCGATCACTTCAACGGGCTTCCCGGGCTTCTCGGAACGCTCGGGCTCGAAGGGCGGCAGCGCCCGCTGGTCGTCGCCGGCCCGCCCGGCATCACGGCGCTCCTGCAGCACCTGCAGCGAGCTGGATCGCTGGGGACCGGCGACATGGAGGTGCGGGTGCTCGAGCAGCAGGGCGACGGCGGAGAGGTCCGCATCGAAGGCTCGCAGTTCCTGGTCGAGAGCCGGCCGCTCGCGCACCGCGTCCCGACATACGGCTTCCGGGTGGCCTTGCCGGACAGGCCCGGCGCGCTCGACGTGGCGAAGACGGACGCCGCAGGTGTGCCGCGCGGGCCCCTGTTGGCGGACCTGAAGGCAGGACGGCCGGTGAGGCTGGCCGACGGCCGCGTAGTGGACCCCGAAGGCCTCGTCGGCCCGCGGCAGAGGGGCGCCTCGATGGCGTACGCGTTGGACACCGTGCCCTGCGTGTCCGCCGTCGAGCTCGGCCGCGGCGTGGATGCCCTGGTGCACGAAGCGACGTACGAGGACGCGCGGGCGGCGCTGGCGCACGAGCGCGGCCACTCGACGGGCGTGGAAGCCGCGCGCATCGCCGCGGAAGCGGAGGCATCCGCGCTGGTGCTGACGCACTTCTCGCCCAGCGTGGACGGCACTGCGCTGGCGGACGAGGCGCGTGCGATCCACCCGCGCATCGTGGCGGCGCAAGACCTCGCGGAGATCCCGCTCTGA
PROTEIN sequence
Length: 305
VRLNLIPLGTSAGRPTLLRGASALAVVTEGAWVLCDCGEGAQIAALRAGLSLSRLDAVLITHLHGDHFNGLPGLLGTLGLEGRQRPLVVAGPPGITALLQHLQRAGSLGTGDMEVRVLEQQGDGGEVRIEGSQFLVESRPLAHRVPTYGFRVALPDRPGALDVAKTDAAGVPRGPLLADLKAGRPVRLADGRVVDPEGLVGPRQRGASMAYALDTVPCVSAVELGRGVDALVHEATYEDARAALAHERGHSTGVEAARIAAEAEASALVLTHFSPSVDGTALADEARAIHPRIVAAQDLAEIPL*