ggKbase home page

13_1_40cm_2_scaffold_2289_3

Organism: 13_1_40CM_2_Deltaproteobacteria_68_14

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(1349..2467)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1I3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 355.0
  • Bit_score: 214
  • Evalue 2.10e-52
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 380.0
  • Bit_score: 207
  • Evalue 7.20e-51
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADJ22733.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 380.0
  • Bit_score: 207
  • Evalue 3.60e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCCTGAGTCGCAACGGAGTCCGTTGATCGCCGCCGGGAGCATCGCCGCGGTGATCGCCGCGGCGGCGGGCACCGTCGTGCTCTTCGTGCGCGAGCACGGCGCACAGGCGCGGCAGACGGAGGCGCTGCAGAAAGAGCTTGCGCAGGGTCCGGTGGTCCGCGTCGCCCGGATCGAGCTCGCCCCGGCGGACCGCGTCGTCTCCCTTCCGGCCGAGGTGCGCGCTGAGCAGCGCGCGACGCTCTACGCGAAGGTGAGCGGCTACGTGAAGAAGGTGTCGGTCGAGCGGGGCGACCGGGTGCGCAAGGGGCAGGTGCTCGCGACCCTCGAATCGCCCGATCTCGAGGCGCAGGTCGCCTCCGCGCAGGCCGAGCTGACGTTCCGCCGACAGCAGCTTGCCCGCGTCGAGCGCCTCGCGCCCTCGGGCCGCGTCTCGGTGCAGGACCGCGAGGCCGCCGAAGAAGGCGTGAAGGTGGCGCGGGCGGCGCTCGCGCGGGCGCAGGTGCAGGTGGACTACCAGGTCTTGCGCGCTCCGTTCGACGGGACCGTGACCGCCCGGTTCGCGGACCCGGGGGCGTTGCTGCCGGCGGCGACGGGCAGCACGTCATCCGCGCAGCCGTTGGTGGAGGTGGCGCAGCTCGATCGGCTCCGCGTCGCCCTACATCTCGGCCAGGACGATGCCGCTCGGGTGCGCGTGGGAGACAAGGTGCAGCTGCAGACATCTCCGGATCAGCCGGCGTTCGAGGCGCGGATCTCGCGGATTTCGCAGAGCCTGGATCCGCGCACGCGGACGATGCAGTGCGAGATCGATCTGGCGCAGCCGCCGGAGGGACTTTATCCGGGCGCGTTCGTGCAGACGCGGCTGCCGCTGCATGGGCCGCCGCGGCCGCTGCTGCCGAGCGAGGCCCTGCTGGGGCAGGGTGGGCAGCTGCTGGTCGCGCTGGTGGAGGACGGGAAGGTGCACTTCCAGCGCGTGAAGCTCGGGGTGGACGATGGCGCGAAGGTGGAGGTTCTCGACGGGCTGCGCGGAGGGGAGATCGTAGCGCTGAATCTGGGCCCGGAAGTGCCCGATGGGTCGCCGGTGCGGATCCAGCAGGAGGTCCGGCGCGAGGGACGATGA
PROTEIN sequence
Length: 373
MPESQRSPLIAAGSIAAVIAAAAGTVVLFVREHGAQARQTEALQKELAQGPVVRVARIELAPADRVVSLPAEVRAEQRATLYAKVSGYVKKVSVERGDRVRKGQVLATLESPDLEAQVASAQAELTFRRQQLARVERLAPSGRVSVQDREAAEEGVKVARAALARAQVQVDYQVLRAPFDGTVTARFADPGALLPAATGSTSSAQPLVEVAQLDRLRVALHLGQDDAARVRVGDKVQLQTSPDQPAFEARISRISQSLDPRTRTMQCEIDLAQPPEGLYPGAFVQTRLPLHGPPRPLLPSEALLGQGGQLLVALVEDGKVHFQRVKLGVDDGAKVEVLDGLRGGEIVALNLGPEVPDGSPVRIQQEVRREGR*