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13_1_40cm_2_scaffold_994_4

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(1745..2410)

Top 3 Functional Annotations

Value Algorithm Source
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 195.0
  • Bit_score: 241
  • Evalue 1.00e-60
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 206.0
  • Bit_score: 236
  • Evalue 2.30e-59
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 182.0
  • Bit_score: 144
  • Evalue 2.60e-32

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAACCTTCAGGTGGTCGAACGAAAGACCGAAGGCGTCGCTGATTCACGGGGCGCGGATGGCGATGGCGATCTTGTCGAAGCGCTCCGCCGGGACGAGCCGATGGCGGCAGAGCGTCTCGTGACGCGATATGGCGAGCGTGCGTATCGCCTCGCGAGCCGCATCACCGGCAACCGCCAGGATGCGGAAGAAGTCGTACAAGACGCGTTCTGGGCCGTGGTCCGGAAGATCGACAGCTTCCGCGGTGAGTCGGCGTTCGGATCCTGGCTCTACCGCATCGTCGCGAACGCGGCCTACCAGAAGCTGCGCCGCCGGCGGAACCGCGAACAGGAGCTGTCGCTGGACGAGGTGCTGCCGTTCTTCGACGAGTGCGGCCGTCATGTCGCTCCCGAGATCGACTGGACGCCGCGAGCGGGCGATCCAGCCGCGCAGACCGAGCTGCGAATGGCGCTGACCGCGGCGATCGACGACCTTCCAGCTGCCTCCCGGACAGCGCTGGTGTTGCGCGACGTCGAGGGGCGATCGAATGAGGAGATCGCGGAGGCCCTCGGGCTCACTGTCCCTGTCGTCAAGACGCGCGTGCATCGCGCCCGGCTGCTCCTGCGGAAGCGACTGGGCGACTGCATGACGACCATCGAGCCGACCGCCGCGGCGTACGCCTCATGA
PROTEIN sequence
Length: 222
MNLQVVERKTEGVADSRGADGDGDLVEALRRDEPMAAERLVTRYGERAYRLASRITGNRQDAEEVVQDAFWAVVRKIDSFRGESAFGSWLYRIVANAAYQKLRRRRNREQELSLDEVLPFFDECGRHVAPEIDWTPRAGDPAAQTELRMALTAAIDDLPAASRTALVLRDVEGRSNEEIAEALGLTVPVVKTRVHRARLLLRKRLGDCMTTIEPTAAAYAS*