ggKbase home page

13_1_40cm_2_scaffold_5410_4

Organism: 13_1_40CM_2_Acidobacteria_60_7

partial RP 37 / 55 BSCG 38 / 51 ASCG 10 / 38
Location: 2885..3373

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39YR9_GEOMG similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 161.0
  • Bit_score: 166
  • Evalue 1.70e-38
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1196083 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 179.0
  • Bit_score: 167
  • Evalue 1.80e-38
ssb; ssDNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 161.0
  • Bit_score: 166
  • Evalue 4.70e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Snodgrassella alvi → Snodgrassella → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCTGTCAATAAAGTGATTCTTGTCGGCCGGCTCGGGCGCGACCCCGAAACCCGCTACACCGGCGCGGGCCAGGCCGTCGCCAATTTCTCGCTCGCCACGGACGAGTCCTACAAAGATCGCAACGGCGAGCGCCAGAAGCGCACCGAGTGGCACAAAATTGTGCTCTGGGGCAAACAAGCGGAAATTGCGCAACAATACCTCAAAAAGGGCTCCCTGATTTTCGTCGAAGGCCGCATCCAAACCCGTGAATGGCAGGACAAAGAGGGTCAGAAACGCACCAGCTTTGAAATCGTCGCCAACAATTTCCGCATGCTCGGCGGCCGCGCGGAAGGTGCCGTGGGGGCGAGCGCCGGTGCCAGCGCCAGCACGGGTGGAACCGATTTCGAAAGTCCGGCCGGCAGCGGAGGAGGAGGTGGCGGAGGCGAGGAATCCGTCGCCGGCAGTGGTGCCGGCCCCGAGATTTCCGACGAAGACATCCCCTTCTGA
PROTEIN sequence
Length: 163
MSVNKVILVGRLGRDPETRYTGAGQAVANFSLATDESYKDRNGERQKRTEWHKIVLWGKQAEIAQQYLKKGSLIFVEGRIQTREWQDKEGQKRTSFEIVANNFRMLGGRAEGAVGASAGASASTGGTDFESPAGSGGGGGGGEESVAGSGAGPEISDEDIPF*