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13_1_40cm_2_scaffold_3341_12

Organism: 13_1_40CM_2_Actinobacteria_66_13

partial RP 12 / 55 BSCG 13 / 51 ASCG 9 / 38
Location: comp(13910..14518)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FF61_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 168.0
  • Bit_score: 97
  • Evalue 1.50e-17
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 168.0
  • Bit_score: 97
  • Evalue 4.40e-18
RNA polymerase {ECO:0000313|EMBL:KIZ22975.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 175.0
  • Bit_score: 97
  • Evalue 2.20e-17

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Taxonomy

Streptomyces sp. MNU77 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCGGAGCCGATCTCGGCATCGAGCGCCGGTGAGGTGCGCGAAGCGCCAACCACATACGAAGCCGGCAACGAGGCGGACTTCGAACGACTCTATCAAGCGTCGTACGGCAAGATCCTCGGCACGTTGACCGCGATGCTCGGCGACCGGGCCGCGGCGGAGGATTGCGCCCAAGATGCATTCGAGCGCGCGTACAAGAAGTGGGCGAGCTGGCAGCCGATCGCGCCGGCCGAAGCCTGGGTACACAGGATCGCGATCAACGCCGCAGTCTCGTACCAGCGCAAGATGCGGCTGCGCGAAGTCGGTGAGGTCATTCGCCGCCTGGGCCGGCCGGGCCTCGCGCCCGACCCCCAGGAGGTCGTGGAGCACCGTGACCTGGCCACCGCGCTGGCCAAGCTGCCGCCGAAGCAGGCGGCGGCGATCGTGCTCCGCCACTATCACGGGTACACGAACCGCGCGATCGCGCAGGCCTTGGGGATTCCGGAGCGGACCGTCGCCTCGAGGCTAGCCGTCGCGAAAGAGCGGCTCCGCGTGATGCTGAAGCACTCGTACGGACCGCAAGCAGACCTCGAGCCCGCCACCGAGCGTGGTTTCGCGGTAGCCGACTGA
PROTEIN sequence
Length: 203
MAEPISASSAGEVREAPTTYEAGNEADFERLYQASYGKILGTLTAMLGDRAAAEDCAQDAFERAYKKWASWQPIAPAEAWVHRIAINAAVSYQRKMRLREVGEVIRRLGRPGLAPDPQEVVEHRDLATALAKLPPKQAAAIVLRHYHGYTNRAIAQALGIPERTVASRLAVAKERLRVMLKHSYGPQADLEPATERGFAVAD*