ggKbase home page

13_1_40cm_2_scaffold_4029_4

Organism: 13_1_40CM_2_Thaumarchaeota_39_13_2

partial RP 7 / 55 BSCG 4 / 51 ASCG 18 / 38 MC: 1
Location: comp(5103..5900)

Top 3 Functional Annotations

Value Algorithm Source
Putative high-affinity nickel-transport protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NBV4_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 235.0
  • Bit_score: 91
  • Evalue 1.50e-15
high-affinity nickel permease similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 255.0
  • Bit_score: 355
  • Evalue 1.20e-95
High-affinity nickel permease {ECO:0000313|EMBL:AIF84947.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatu similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 255.0
  • Bit_score: 355
  • Evalue 5.80e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 798
ATGATATCAGATATCTGGCCATTTGTTCTAGTATCAATTCCCACAATGATAGTTCTTGGGATTCGCCATGGCCTTGATGTAGACCACATAACAGCAATAGACAATCTTGTTAGACTACACAATGCTGGTACAAGATCAAGATGGGTAGGTGCTGGATTTAGCACAGGTCACATGGTATCAGTGCTGGCAGAGATGATCTTTATCATCTCTGTTATCGGAAGCGTTACAAGTGCTGGCAGTATTTCATTTTTTGGTGGTGTAATAGGTGCCATTGCACTTGGTATCATAGGTGCAATCAACTTGTACTCTATAAAAAAGTGGGGAAAGAGCGGGTCTGCAATACTTGCAAGCAAGATTCTTGGAAAAACTGGAATATTGGGACCTGTTATTTCTGCTATGGTTACTGGTTTGGTGTTTGGTTTAGGCTTTGACACCGCGACTCAGATCTCTGCAATTACCTTATCTGCTGTTGCATCTGCTACTGCTGGTGTCCAGATTGCTCTAGTTCTTGCAGGGTTCTTTGCCCTAGGAATGATTCCAGTTGATACATTTGATAGTGTCATTCTTCGCTCTGCATTTTCTAGGACGCTTGGGACCAAGGGATTTCGGTACATCTCATATGGGCTAAGTGGAACTGCTATTACAGTTGCCTCACTTGCTTCTTTTCAAATGATAACAAAGACAAGTATCATGCCAGAATTTACCGGTCCTGTTCTAGCAGTCGCTATACTATCAGCATCATTTGGGTATGCTGTTTTATCCAGGAAAAAAAGAAACCTTGGTACCATCCCAAAATAG
PROTEIN sequence
Length: 266
MISDIWPFVLVSIPTMIVLGIRHGLDVDHITAIDNLVRLHNAGTRSRWVGAGFSTGHMVSVLAEMIFIISVIGSVTSAGSISFFGGVIGAIALGIIGAINLYSIKKWGKSGSAILASKILGKTGILGPVISAMVTGLVFGLGFDTATQISAITLSAVASATAGVQIALVLAGFFALGMIPVDTFDSVILRSAFSRTLGTKGFRYISYGLSGTAITVASLASFQMITKTSIMPEFTGPVLAVAILSASFGYAVLSRKKRNLGTIPK*