ggKbase home page

13_1_40cm_2_scaffold_3314_1

Organism: 13_1_40CM_2_Acidobacteria_64_6

partial RP 45 / 55 MC: 10 BSCG 37 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 35..652

Top 3 Functional Annotations

Value Algorithm Source
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 205.0
  • Bit_score: 254
  • Evalue 1.10e-64
50S ribosomal protein L17 id=12555551 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 201.0
  • Bit_score: 215
  • Evalue 5.20e-53
rplQ; 50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 146
  • Evalue 6.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAGACATCGAGTCGCACATCGGAAGCTGGGACGCGTCACCGAGCATCGCATCGCGATGCTGCGGAATCAGGCGACGGCCCTGCTCCGCTACGAGCACCTGACGACGACCGTGCCGCGGGCGAAAGAGCTGCGGCCGTTTGTCGAGCACTTGATCACGATCGCCAAGCGAGGGCTCGCCGGCGGAGATGAAAACGGTCACGTGCTCAACGCGCGGCGCCTCGTCATGCACGACCTGCAGGACCGTGAGGTCGTGACCAAACTCTTCGACGCCATCGCGCCGCGCTTCGCGTCGCGGCCCGGCGGCTACACTCGGTTGCTGCGCCTCGGCTATCGCAGGGGCGACAGCGCGGAAGTGGCGCAGGTCGAGTTGATTGGCAGCGAGTTCGATCCCAAAGCCAAGCCTGAGACCGAAGCGAAGAGTGAGGGCGAGAAGCCGAAAGCCAAAGCGGGCGTCGGCGGAAGGCTCCGCGCGGCGGCCGAGCGGCTGCGCGGCGGAAAAAAAGCGGCAGGGGCTGAAAGCGAATCGGCGGCAGCCACCGAGGCGAAGGCCGCCAAGCGCGCGGCGAAGAAAGGAACCGCCGGCAAGAAGATGGGCGGTTCGTCCAAAGGCAAATAG
PROTEIN sequence
Length: 206
MRHRVAHRKLGRVTEHRIAMLRNQATALLRYEHLTTTVPRAKELRPFVEHLITIAKRGLAGGDENGHVLNARRLVMHDLQDREVVTKLFDAIAPRFASRPGGYTRLLRLGYRRGDSAEVAQVELIGSEFDPKAKPETEAKSEGEKPKAKAGVGGRLRAAAERLRGGKKAAGAESESAAATEAKAAKRAAKKGTAGKKMGGSSKGK*