ggKbase home page

13_1_40cm_3_scaffold_70_20

Organism: 13_1_40cm_3_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(17530..18624)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIL9_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 375.0
  • Bit_score: 371
  • Evalue 1.30e-99
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 375.0
  • Bit_score: 371
  • Evalue 3.70e-100
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACY48327.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 375.0
  • Bit_score: 371
  • Evalue 1.80e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1095
ATGAAGCGCCGTACGATCATCATCTCTGCCGTCGTGGTCGCCGTCCTCGGCCTGGGCACCATGGCCGCCACCGGAAGGTTCGGCGGCAAGAAGAAGGAAGGGCCGAAAGCGGTGGCGGTCGTCCGCGGGTCCCTGGTCGATAAGGCCCTCGCCGTCGGCACCATCGAGCCCCGCATCGAGGTCAGCGTCAAATCCATCTTGGCCGGAGTGGTGCGGCGGCGCTTCGCCGCAGTCGGGGACTTCGTCAAGCGGGGCCAGCCGCTGCTTGAGATCTCACCCAACCCGACGCCGCTGGAAATGGTGGAGCTCCGGCGCAGCGTGGAGCTGCGCGAGATCGAGCTCAAGAACGTGGAGCGCGAGTTGACCCGCCAGCAGGAGCTGCGCAACAAGAACCTGATTTCCCCCGCCGATCTCGAGACCGCGCAGCGGCAGGTAGACGAGGCGCGCTCGCAACTGTCGCTGGCGCAAGAGCGGCTGGCGTTACAGGAAGGGGGCACGGTGCTGGCCAACGGCAAGCCGGTGGAGACCGTGGTCCGCGCCCCCATCGACGGTTACATCCTCGAGGACTCGATCGAGATCGGCGACCCCGTGGTGCCGCTCACGCCGTACCAGGCAGGCACCGTGCTGATGCGCATGGCGGCGATGCGGGACTTGATCTTCCGGGGAACTGTGGACGAGATCGACGTGGGTCGGCTGAAGGAGGGCATGCCGGCAACCATCAAGATCGGCGCCCTGCCCAACGCGAGCGTGCAGGGCCGGCTCGAGAAGATCTGGCTCAAGGCGCACAAGCAGGAGCAGGCGACGGTCTTTCCGATCGAGATCGTCCTGACGGAGGTGGCAGGCGCCACGCTGCGCGCGGGCTACTCGGCCAACGCGGAGGTGACCATTTCGCGCCGGGACAGCGTGCTCTACATCCCGGAGCGGCTCATCACCCACCGCCATGACTCGAGCTTCGTGACCGTGCGCACGGGCCCCGGCAAGACCCAGGAGCGCTGGATCAAGACCGGCCTCTCCGACGCCATCAACATCGAGGTGCTGGAGGGCCTGCAGGTGACCGACTCGATCGTCGAGCCGCCGCCGCGCGAGATCACCTGA
PROTEIN sequence
Length: 365
MKRRTIIISAVVVAVLGLGTMAATGRFGGKKKEGPKAVAVVRGSLVDKALAVGTIEPRIEVSVKSILAGVVRRRFAAVGDFVKRGQPLLEISPNPTPLEMVELRRSVELREIELKNVERELTRQQELRNKNLISPADLETAQRQVDEARSQLSLAQERLALQEGGTVLANGKPVETVVRAPIDGYILEDSIEIGDPVVPLTPYQAGTVLMRMAAMRDLIFRGTVDEIDVGRLKEGMPATIKIGALPNASVQGRLEKIWLKAHKQEQATVFPIEIVLTEVAGATLRAGYSANAEVTISRRDSVLYIPERLITHRHDSSFVTVRTGPGKTQERWIKTGLSDAINIEVLEGLQVTDSIVEPPPREIT*