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13_1_40cm_3_scaffold_5978_10

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: comp(6420..7013)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L8Q5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 190.0
  • Bit_score: 198
  • Evalue 6.30e-48
TetR family transcriptional regulator Tax=RBG_16_RIF_CHLX_70_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 195.0
  • Bit_score: 220
  • Evalue 2.20e-54
putative TetR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 194.0
  • Bit_score: 195
  • Evalue 1.50e-47

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Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCGCGGACCGGTAGGAGGCCCGGGCCAGGCCGCACGCGGGAGAAGATCCTCGCCGCCGCGCGGTCCCAGTTCGCCAAATCCGGCTTCGAGAGCACGACCATCCGCGGCATTGCCGCCGGCGCCCACGTCGATCCGAAGCTGGTCCTTCACTATTTCGAGTCGAAAGAAGGGATCTTCCAGGCAGCGATGGACTTTCCCTTCGACCCGGCGCAGGCCATCCCTGAGTTGCTGAGGCCGGGGTTGGACGGGCTCGGCGTCCGGTTGGCCCGTTTCTTCATCGACATCTGGGATTCACCGGCGGGCGTCCGCGCCCACGCCATCGTGCGCTCGATGGTCACCAGCGAAAGCGCCGCGGCGCTGATGCGCGACTTCGTCAGCCGGGAGATCCTGGCCCGGGTTGCCCAGGCGCTCGAGCTCGACCACCCTCAAGTTCGGGCCAGCCTCGCGGCCAGTCAGCTGATCGGGCTGGCCATGCTTCGCTACGTGGTGAAGGTCGAGCCGCTCGCCTCAGCGCCCCCGGCCAAGCTCGCGGCCTGGATCGGACCCACCTTGCAACGCTACTTCACGGACCCGCACGCAACTCGCCCGTGA
PROTEIN sequence
Length: 198
MARTGRRPGPGRTREKILAAARSQFAKSGFESTTIRGIAAGAHVDPKLVLHYFESKEGIFQAAMDFPFDPAQAIPELLRPGLDGLGVRLARFFIDIWDSPAGVRAHAIVRSMVTSESAAALMRDFVSREILARVAQALELDHPQVRASLAASQLIGLAMLRYVVKVEPLASAPPAKLAAWIGPTLQRYFTDPHATRP*