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13_1_40cm_3_scaffold_2794_25

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(20451..21695)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 411.0
  • Bit_score: 603
  • Evalue 2.50e-169
MacB-like periplasmic core domain protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 412.0
  • Bit_score: 498
  • Evalue 1.70e-138
ABC efflux pump, inner membrane subunit id=24436238 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 415.0
  • Bit_score: 300
  • Evalue 3.20e-78

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1245
GTGCCTCTCTTCGAAGCCCTTCGCCTCGCTCTGCAAACCGTCTGGAGCCACAAGCTCCGCTCCTTCTTCACGCTGCTCGGCATCATCGTCTCGGTCGCCTTCCTCGTCGCCGTCGTCGCCGTCATTCAGGGAATGAACGCGTACGTGCGCGAGCGGCTGGCGGGGGCAATCGTCGGCGTCAACGCGTTTCAGATCCGTCGCGATCCGATTCAGGTCGGCTTCATCGACGACGAGGCGTGGAAGCAGATCCAGCGGCGGCCGATTATTGCGCCCGAAGACGTCGCCTATATCGAACGCGCGGTGCCCGACGCGGAGGCGATCGCCCTGCAATCAGGCTGGCCGACACCGATGGCCGACGTGCAATGGCGCAATCGCACGACGGGCGACGTCTTCATCTTCGGCGTCACGGCGCCCTACGTGCTCGTGCAGGACTACACCTTCGCCGCGGGCGAGCCGCTCACGGATATCGACGTGCAGCAGCGGCGTTATGCCGCCGTGCTGGGCTACGACGTCGCCGAAAAGCTGTTCGGCGACGCGGCGGCGGCGGTCGGACAGATGATCCGCGTGCACGGCATGCAGCTGATCGTGAAGGGCGTGATCGCGCGCAAAGGCACGGTCCTGGGCCAGTCGTGGGATGGGTTCGTCATGCTGCCGTTGACGACCTTCGAGTCGATGTATGGACGACGGCAGACGATGGTGATCTCCGTGAAGATGGCGACGGCCGCGGGTGTCGCTCCGGCGATGTTGCGGGCGGAAGAAGCGATGCGCGTCGCGCACCGCTTGCGGCCCGGATCGGATAACGACTTCACCGTGGACACGGGCGAAGGGTTGATCGCGTTCTGGGGGAAACTCACGCGCGTCATTTTCACCGTGGTTCCCGCGGTGGTCGTCATTGGGATCGTGGTAGGCGGCATCGTCATCATGAACATCATGCTCATGAGCGTGACGGAGCGCACGCGCGAGATCGGGATACGCAAGGCGTTGGGCGCCGCGCGCCGCGACATCCGTCGCCAGTTCTTTGCCGAGGCGCTGACGCTGTCGCTGCTCGGCGGGATTGCGGGGCTCGCGGTCGGAGCCGGCCTGGCCGGACTCGTGCAGGTCCTTTCCCCGTTGCCGGCTCGCGTGACCGCGTGGTCAATCGGCCTGGCGCTGCTCTTAGGCATCGTCGTCGGCGTGGCGTTCGGCGTCTATCCGGCCCATCGGGCCTCGCGCCTCGATCCGATCGAGGCACTCCGCCAGGAATAG
PROTEIN sequence
Length: 415
VPLFEALRLALQTVWSHKLRSFFTLLGIIVSVAFLVAVVAVIQGMNAYVRERLAGAIVGVNAFQIRRDPIQVGFIDDEAWKQIQRRPIIAPEDVAYIERAVPDAEAIALQSGWPTPMADVQWRNRTTGDVFIFGVTAPYVLVQDYTFAAGEPLTDIDVQQRRYAAVLGYDVAEKLFGDAAAAVGQMIRVHGMQLIVKGVIARKGTVLGQSWDGFVMLPLTTFESMYGRRQTMVISVKMATAAGVAPAMLRAEEAMRVAHRLRPGSDNDFTVDTGEGLIAFWGKLTRVIFTVVPAVVVIGIVVGGIVIMNIMLMSVTERTREIGIRKALGAARRDIRRQFFAEALTLSLLGGIAGLAVGAGLAGLVQVLSPLPARVTAWSIGLALLLGIVVGVAFGVYPAHRASRLDPIEALRQE*