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13_1_40cm_3_scaffold_500_20

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(21078..22925)

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 614.0
  • Bit_score: 864
  • Evalue 6.80e-248
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 611.0
  • Bit_score: 812
  • Evalue 2.90e-232
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 606.0
  • Bit_score: 767
  • Evalue 3.90e-219

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Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1848
GTGGCGGACAAGAAACCCAAGACGAACTATTCGAACGCCTGGCGCGAAGCGCGGCAGCTCATCTGGCAACATCGGAGTCGCCTCGCGATCGGTGTGCTGTTGATGCTGGTCAGCAGGCTCGCCGGGCTCGTACTGCCGTGGTCGTCGCGCTATCTCATCGACCAGGTCGTGGGACAGAAACGCGCTGACCTGCTCGGTGTGATCGCGGCGGCGGTTGGCGTGGCGGCGATTGTCCAGGCGATAGCCTCGTTCGGGCTGTCGCAGATCCTCGGGGTCGCCGCCCAACGCGCCATCACGGATATGCGGAAGTCCATACAGGCTTTCGTGTTGCGATTGCCCATCGCGTATTTCGACTCGACCAAGACCGGGATCCTCATCTCGCGCATCATGACCGATGCTGAGGGCGTCCGGAATCTGGTGGGCACCGGGCTGGTGCAGCTCGTCGGGGGACTCGTCACCGCCACGATCGCGTTGGGCGTGCTGTTCTGGTTGAACTGGAAACTGACGACGATGTCGATTCTCATCCTCGCGCTGTTCGGCGGCGGGATGGCGTATGCGTTCGCCAAACTGCGCCCGCTGTTCCGCGAGCGTGGCAAGATCAACGCCGAGGTCACCGGCCGGCTCGCCGAGACGTTGGGAGGGATTCGCATCGTGAAAGCGTACCGGTCGGAGCGCGGCGAGCGACTGGTGTTCGCGCGCGGCGCGCACCGGCTGTTCCGCAATGTTGCGACGACCATGACGGGCGTCTCGGGCGTCGGCGCCTTCGCTCAGGTCGTGATCGGAGCGATCGCGGTCGTCATGATTCTCATCGGCGGACGCTCGGTCCTCGCACAATCCATGACGTTGGGGCAGTTCGTCCAATACGTCTTTTTCGTGGGACTCGTCGCGCTGCCCCTGATCAACATCGCGTCCATCGGCACGCAAATCACCGAAGCATTCGCGGGGCTCGACCGGATTTATGAGCTGCGCCGCATGACCACCGAGGACGCCGAAGACGGGAAGCGGGCGCCGCTCGGCGCGGTGCGCGGCGACGTGGCGTTCGATCACGTGACCTTCGCGTACAAACCGGGCGTGCCTGTCCTCAAGGACGTGTCGTTTCGCGCGCCCCCGGGGTCGACGACGGCACTCGTCGGGTCGTCCGGATCCGGCAAGAGCACATTGATCGGTCTCGTGCTCGCATTCAATCGGCCGGAGCAGGGACGCGTGCTCGTGGACGGCCGCGACCTGGCGTCCGTGCCGCTCGCCGATTATCGCACGCAGCTCGGCGTGGTGTTGCAGGACAACTTCCTGTTCGACGGCACGATCGCCGAGAACATCGCGTTCGCCCGGCCGCACGCGTCGCGGCAGGAGATCGAGGAAGTGGCGCGCATCGCGCACTGTGACGAGTTCATCGAGCAGTTCGACGAGAAGTACGACACGGTCGTCGGCGAGCGCGGCGTGAAGCTGTCCGGCGGCCAGCGCCAGCGCATCTCGATCGCCCGGGCGATTCTCGCCGATCCGCGGATCCTGGTGCTCGACGAAGCGACCTCGAGTCTCGATTCCGAGAGCGAAGCCAAGATCCAGGACGGGTTACGCGCGTTGCGCCACGGCCGGACGACGTTCGTGATCGCGCACCGCCTATCGACGATTCGTAGCGCGAATCAGATCCTGGTGCTCGAGGGCGGCAGAATCGTGGAGCGGGGGACGCACGAAGAGTTGCTGGTAGCTAACGGGCGCTACCGCCAGCTGTATGACAAGCAGTACAACTTCGAGCGGGATCGGTTCATCAACCCTGGAGAGGACTTCACGCCGGAGCCGGTGGAAGAGGGCATCGCCGTGCCGCCGGTGACACCACCTACTCGTCTGTAA
PROTEIN sequence
Length: 616
VADKKPKTNYSNAWREARQLIWQHRSRLAIGVLLMLVSRLAGLVLPWSSRYLIDQVVGQKRADLLGVIAAAVGVAAIVQAIASFGLSQILGVAAQRAITDMRKSIQAFVLRLPIAYFDSTKTGILISRIMTDAEGVRNLVGTGLVQLVGGLVTATIALGVLFWLNWKLTTMSILILALFGGGMAYAFAKLRPLFRERGKINAEVTGRLAETLGGIRIVKAYRSERGERLVFARGAHRLFRNVATTMTGVSGVGAFAQVVIGAIAVVMILIGGRSVLAQSMTLGQFVQYVFFVGLVALPLINIASIGTQITEAFAGLDRIYELRRMTTEDAEDGKRAPLGAVRGDVAFDHVTFAYKPGVPVLKDVSFRAPPGSTTALVGSSGSGKSTLIGLVLAFNRPEQGRVLVDGRDLASVPLADYRTQLGVVLQDNFLFDGTIAENIAFARPHASRQEIEEVARIAHCDEFIEQFDEKYDTVVGERGVKLSGGQRQRISIARAILADPRILVLDEATSSLDSESEAKIQDGLRALRHGRTTFVIAHRLSTIRSANQILVLEGGRIVERGTHEELLVANGRYRQLYDKQYNFERDRFINPGEDFTPEPVEEGIAVPPVTPPTRL*