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13_1_40cm_3_scaffold_11762_4

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: comp(4500..4787)

Top 3 Functional Annotations

Value Algorithm Source
rbpA; RNA-binding protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 104.0
  • Bit_score: 118
  • Evalue 5.60e-24
Putative RNA-binding protein id=2817745 bin=GWA1_Deltaproteobacteria_52_35 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 95.0
  • Bit_score: 113
  • Evalue 9.90e-23
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 97.0
  • Bit_score: 104
  • Evalue 1.70e-20

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Taxonomy

RIFOXYD1_FULL_Bdellovibrionales_55_31_curated → Bdellovibrionaceae → Bdellovibrionales → Bdellovibrio → Bacteria

Sequences

DNA sequence
Length: 288
TTGTTTGTTGGAAACCTTTCTTTCCAAACGACCGAAAATGATGTTAGCGACGCCTTTGCGCACTGTGGCACCGTGGAAGCTGTGAGCATCATTACGGATCGCGAAACAGGCCGCTCGAAAGGCTTTGGTTTTGTCACGATGTCCGAAGAAGATGCGGATAAAGCGATCACGCAATTAAATGGGTCGCAGCTTGACGGCCGCGCCCTGACTGTCAACGAAGCGAAACCCATGGTGAAGAGAGACTTCGGCGGTGGTCGGAATAGTGGCGGCGGCCGCAACCGATACTAA
PROTEIN sequence
Length: 96
LFVGNLSFQTTENDVSDAFAHCGTVEAVSIITDRETGRSKGFGFVTMSEEDADKAITQLNGSQLDGRALTVNEAKPMVKRDFGGGRNSGGGRNRY*