ggKbase home page

13_1_40cm_3_scaffold_10542_6

Organism: 13_1_40CM_3_Nitrospirae_62_11

partial RP 31 / 55 BSCG 28 / 51 ASCG 8 / 38
Location: 5424..5996

Top 3 Functional Annotations

Value Algorithm Source
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 190.0
  • Bit_score: 233
  • Evalue 2.40e-58
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 189.0
  • Bit_score: 196
  • Evalue 5.00e-48
Putative Ribosomal RNA small subunit methyltransferase D n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG87_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 189.0
  • Bit_score: 196
  • Evalue 1.80e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 573
ATGCGCGTCATTGCCGGGCTTCAGAAGGGACGGCGGCTGGTGGGACCCAAAGGGCCTGGCCTGCGCCCGACCGCGGATCGTGTCAAGGAGGCGTTGTTTGCGATCCTTGGGCCTCGAATCGACGGAGCGCGTTTCCTGGATCTCTACGCGGGGACCGGGGCGATCGGGATCGAAGCCCTCAGCCGCGGTGCCCGATGGGTCACCTTCGTCGAATCGGACCCGACGGCCCTCCGTGTCCTGCGGGCTAACTTGAAGATGTGTGGGATGGGAGCATCAGCCGACATTCAGGCCTGTCGTGCGGGCGTCTTCCTCCGACGGAGGGAGGCGCGGGGCGGTCCCTATGATCTCGTGTTTGCGGACCCGCCCTACCACACCGGCACCGGGGCGACGCTGTTGCCATCACTGGATCAAGCTGCTATCATACCGCCCGAATCAACCGTGATCCTCGAACGGTTCACCAAACTGCCACTTCCCTCCCAGGTTGGCCGCCTGACCCTCGTGCGCGAGTATGGCTATGGTGATACCACCCTGTCGCTGTTCGGGGTCACGGTGAAGGGGACTCCTGCCCCATGA
PROTEIN sequence
Length: 191
MRVIAGLQKGRRLVGPKGPGLRPTADRVKEALFAILGPRIDGARFLDLYAGTGAIGIEALSRGARWVTFVESDPTALRVLRANLKMCGMGASADIQACRAGVFLRRREARGGPYDLVFADPPYHTGTGATLLPSLDQAAIIPPESTVILERFTKLPLPSQVGRLTLVREYGYGDTTLSLFGVTVKGTPAP*