ggKbase home page

13_1_40cm_3_scaffold_2594_27

Organism: 13_1_40CM_3_Nitrospirae_62_11

partial RP 31 / 55 BSCG 28 / 51 ASCG 8 / 38
Location: 15337..16845

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-54 (Sigma N) factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCY5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 505.0
  • Bit_score: 693
  • Evalue 1.60e-196
  • rbh
rpoN; RNA polymerase, sigma-54 (sigma N) factor; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 507.0
  • Bit_score: 710
  • Evalue 1.30e-201
rpoN; RNA polymerase, sigma-54 (sigma N) factor similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 505.0
  • Bit_score: 693
  • Evalue 4.50e-197

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1509
ATGAAACTGCGGCTTGATCTTCGGCTGAGTCAGAAGCTCATCATGACGCCGCAGCTGCAGCAGGCGATCAAGTTATTGCAGCTCTCCAGGTTGGAGCTTCAGCAGACCCTGACCCAACACCTGATGGAGAATCCCTTGCTGGAGGAGGTGCAGGCCGACCTCGAAGAGGGGGAAGCCCCCACGCTTGAAGAATCAGGTCAGGACAAGAAGGAGGTCGGACCGAGCGAAGGGGGAGCAGAGGAGCCTCAGGCGGAAAGCACCGATCCCCCCGAGGATCTCTCGCCCACCGGGTGGGAGGACTACTTCGACAGCGATCGTCGGGCTGGCGACGTGGAATATCCCTCCGCTTCCCAGGATGAGTTCCCCTCCTACGATCAGACGCTGACCAAGCCGACTTCGTTGGAGGACCATCTCCTCTGGCAGCTGGCCCTCTCCGGATTGATCGGTCGCGAGAAAAGTATCGGCCAGATGATCATCGGCAACCTGGATGACGATGGCTATCTGAGGACACCGCTGAACGAGATTGCCACCGAAGCCAGCGCCTCGGTGGAGGAGGTCGAATCTGTTCTCAAACACGTCCAGACCTTCGATCCGGCCGGCGTGGGAGCTCGGGATTTGCGCGAATGCCTGTTGATCCAACTGAGCCACCTCGACCGAGACCCGATCGGGGCAGTCGGACGGAAAGCGGGAGTCTTGGGGGGCTCGCTCGTGGAGTCGATCGTGAGCAATCACCTCAAGGATCTCGAGAAAAAACAGTACGGGCGGATCGCCAAGGCACTGGGCGTCACGGTCGAGGACGTCTTTGAAGCGACCCGAGTCATCGAGGGGCTCGAGCCCAAACCAGGGCGTCCGTATTTTACGGCCGATAATCAAGTGATCGTGCCCGATGTCTTCGTGGCCAAGAACGAAGGCGAATGGGTGGTGCTTCTCAATGATGATGGTCTGCCACGCCTGCGGATCAACCCGTATTACAGGCGGCTTATGGCCGGCCGGAAGGCCGACTCGGAAGCGACCAAGGCCTATTTGGATGAGAAACTCCGAGGTGCGCAGTGGATCATCCGGAGCATCGAACAGCGCAATAAGACTATCATCAAGGTCGTGGGGAGCATCGTCAAATTCCAAGAGCAGTTTTTTGAGCAAGGTGTTCAGTTTCTCAAACCGTTGGTCCTCAAACAGGTGGCGGAAGACATCGGCATGCATGAATCGACGATCAGCCGGGTGACCGCGAACAAATATATGCACTGTCCGCAGGGAGTGCTCGAGCTGAAATTCTTCTTCAACACCGGCATCCAGCGTTCTGATCAGAGCGCTGACATGTTATCCTCCGTCACAGTCCGAGAAATGATTCGTAAGATGGTGGCTGAGGAGGATTCGCAACACCCGCTCAAGGATCAGGAGATTGCGGCGAGGTTGCGCAGCCACCAGATTATGATCGCCAGGCGGACTGTGGCAAAATATCGATCCGAAGAAAACATTCCATCCGCAAGCCAGCGCAAACGCTTTTTTTAA
PROTEIN sequence
Length: 503
MKLRLDLRLSQKLIMTPQLQQAIKLLQLSRLELQQTLTQHLMENPLLEEVQADLEEGEAPTLEESGQDKKEVGPSEGGAEEPQAESTDPPEDLSPTGWEDYFDSDRRAGDVEYPSASQDEFPSYDQTLTKPTSLEDHLLWQLALSGLIGREKSIGQMIIGNLDDDGYLRTPLNEIATEASASVEEVESVLKHVQTFDPAGVGARDLRECLLIQLSHLDRDPIGAVGRKAGVLGGSLVESIVSNHLKDLEKKQYGRIAKALGVTVEDVFEATRVIEGLEPKPGRPYFTADNQVIVPDVFVAKNEGEWVVLLNDDGLPRLRINPYYRRLMAGRKADSEATKAYLDEKLRGAQWIIRSIEQRNKTIIKVVGSIVKFQEQFFEQGVQFLKPLVLKQVAEDIGMHESTISRVTANKYMHCPQGVLELKFFFNTGIQRSDQSADMLSSVTVREMIRKMVAEEDSQHPLKDQEIAARLRSHQIMIARRTVAKYRSEENIPSASQRKRFF*