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13_1_40cm_3_scaffold_871_7

Organism: 13_1_40CM_3_Nitrospirae_62_11

partial RP 31 / 55 BSCG 28 / 51 ASCG 8 / 38
Location: 3551..4516

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 327.0
  • Bit_score: 416
  • Evalue 3.10e-113
  • rbh
rpoS; RNA polymerase, sigma S (sigma 38) factor similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 327.0
  • Bit_score: 416
  • Evalue 8.80e-114
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 327.0
  • Bit_score: 416
  • Evalue 4.40e-113

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 966
ATGGGCCGTGATGACGAAGATCTGAACCAGCCGACCGAAGCCGACGACGAACGGGAGGATGAAGTCGCGCTGAAGGAGTCTTCCGAGCCGGACGAGGCTCCCGAGAAGCACGAGGATCGGAAAGGGGAGCGATCCGAAGGGCTCGATGCCGTGAAGAGCTACCTCAGAGATATCCGCCACTCCACTCTGCTGACGTTTGAGCAGGAGCAGGAACTTGGAAAGCGCATGGCCACGGGAGACTTCAGCGCCCGCGAGCAGATGATCGAGTCAAACCTTCGACTGGTCGTCAGTATCGGCAAGCGCTACATGAATCGGGGGCTGCCGTTCGCGGACATCGTCGAAGAAGGCAACCTTGGCCTGATTAAGGCCGTCGAAAAGTTCGACTATGCGCGCGGCTTCCGGTTCAGCACGTATGCCTCCTGGTGGATCCGCCAGTTCATCGAGCGCGCCATCATCAATCAAGCCAAGCTCATTCGGCTGCCGGTTCACGTCGTGGAACGGCTCAACCGCTACCTCTCGGAAGTCGAACAGCTGGTCCAGGAGCTGGGGAGGGAGCCGAGGGCCGACGAGACCGCCGACCGCATGCGGATTCCAGAACAGGACATCATCAACCTGAAGCTCTTGATCCGAACCACGTACTCCCTGGATAGTCCGATTTCCGAGGGGACGGACACATTCCTGCGCGATGTGATCGAAGATCCGATGGCCGTCTCTCCCGCCACCAACGCTGAAGGGGTGCAGCGGCGCGAGGAAATCATGACCTGGATGCAGGATCTGCAGGAGAAGGAGAAGACGGTGATCGTGCTCAGGTTCGGACTGGGCGGGGACGAGGCCCAAACCTTGGAGGAGATCGGCCGCGATCTCGGGTTGACGCGCGAGCGCGTCCGGCAGATTGAAACCGCCGCCTTGCTGAAACTGCGGGCCATCATCGATAAAAAGACTCTGAGGCAGGAGGATCTCTTATAG
PROTEIN sequence
Length: 322
MGRDDEDLNQPTEADDEREDEVALKESSEPDEAPEKHEDRKGERSEGLDAVKSYLRDIRHSTLLTFEQEQELGKRMATGDFSAREQMIESNLRLVVSIGKRYMNRGLPFADIVEEGNLGLIKAVEKFDYARGFRFSTYASWWIRQFIERAIINQAKLIRLPVHVVERLNRYLSEVEQLVQELGREPRADETADRMRIPEQDIINLKLLIRTTYSLDSPISEGTDTFLRDVIEDPMAVSPATNAEGVQRREEIMTWMQDLQEKEKTVIVLRFGLGGDEAQTLEEIGRDLGLTRERVRQIETAALLKLRAIIDKKTLRQEDLL*