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13_1_40cm_3_scaffold_19656_4

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: 1176..1535

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1237085 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 119.0
  • Bit_score: 193
  • Evalue 1.30e-46
Putative 2'-5' RNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID41_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 119.0
  • Bit_score: 192
  • Evalue 2.10e-46
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 119.0
  • Bit_score: 193
  • Evalue 2.60e-47

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 360
GTGCAGTTTAAGCCTTTTACGATTATCTACACAGGCGTCGGGGCATTTCCGAAGCCTTCGTCTGCCCGGGTCGTCTGGGTTGGCGTAGATCAGATAGGGGGCGAAAAGCTGATGGCGCTTGCAGATGACGTGGTGGCAAAAATGACCGAACTTGGATTTTCCGCGGACAAGCCGTTCTCGCCTCACATGACTATTCTCCGCGCAAGGCGCCGGCCGGTCAAGATAGGCGACGTTTCTGCAAAATACCAGGACAGGACGTTTGGCTCTGACGTGGTAGACAAGGTACACCTAAAAAAGAGCGACCTCACAGCAGCAGGCCCGGTCTACTCGAACATTTATACCGTAGAAGCCAAGAAATGA
PROTEIN sequence
Length: 120
VQFKPFTIIYTGVGAFPKPSSARVVWVGVDQIGGEKLMALADDVVAKMTELGFSADKPFSPHMTILRARRRPVKIGDVSAKYQDRTFGSDVVDKVHLKKSDLTAAGPVYSNIYTVEAKK*