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13_1_40CM_3_Thaumarchaeota_50_5

13_1_40CM_3_Candidatus_Nitrososphaera_gargensis_50_6

Consensus taxonomy: Candidatus Nitrososphaera gargensis  →  Nitrososphaera  →  Nitrososphaerales  →  Nitrososphaeria  →  Thaumarchaeota  →  Archaea

Taxonomy override: Thaumarchaeota

Displaying items 1-50 of 370 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_3_scaffold_86434
Species: RBG_16_Thaumarchaeota_49_8_curated (50%)
2 1972 bp 54.31 5.70 95.39
13_1_40cm_3_scaffold_106258
Species: Candidatus Nitrososphaera gargensis (50%)
2 1789 bp 54.22 5.37 65.23
13_1_40cm_3_scaffold_122991
Species: Nitrososphaera viennensis (50%)
2 1668 bp 54.14 5.49 77.34
13_1_40cm_3_scaffold_263426
Species: Nitrososphaera viennensis (66.67%)
3 1146 bp 54.10 4.06 58.38
13_1_40cm_3_scaffold_388463
Species: RBG_16_Archaea_50_20_curated (100%)
2 1313 bp 54.07 4.46 99.62
13_1_40cm_3_scaffold_41935
Domain: Archaea (66.67%)
3 3569 bp 54.02 3.78 67.50
13_1_40cm_3_scaffold_138191
Species: uncultured marine thaumarchaeote KM3_04_H06 (50%)
2 1577 bp 53.96 4.19 87.32
13_1_40cm_3_scaffold_359521
Species: RBG_16_Bathyarchaeota_48_13_curated (100%)
1 1093 bp 53.80 4.94 98.81
13_1_40cm_3_scaffold_278606
Species: RBG_16_Bathyarchaeota_48_13_curated (100%)
1 1111 bp 53.74 3.51 99.91
13_1_40cm_3_scaffold_69859
Domain: Archaea (75%)
4 2175 bp 53.70 5.93 89.66
13_1_40cm_3_scaffold_210394
Species: Candidatus Nitrososphaera gargensis (100%)
1 1284 bp 53.66 7.24 99.77
13_1_40cm_3_scaffold_277636
Species: Candidatus Nitrososphaera gargensis (100%)
1 1113 bp 53.64 6.20 99.73
13_1_40cm_3_scaffold_242606
Species: Candidatus Nitrososphaera gargensis (100%)
1 1195 bp 53.64 5.27 92.64
13_1_40cm_3_scaffold_267825
Species: Candidatus Nitrososphaera gargensis (100%)
1 1136 bp 53.61 5.02 99.82
13_1_40cm_3_scaffold_190781
Species: Candidatus Nitrososphaera gargensis (100%)
1 1349 bp 53.60 4.67 99.85
13_1_40cm_3_scaffold_313797
Species: Candidatus Nitrososphaera gargensis (50%)
2 1017 bp 53.59 3.54 103.25
13_1_40cm_3_scaffold_239210
Species: RBG_13_Bathyarchaeota_38_9_curated (100%)
1 1203 bp 53.53 7.11 87.53
13_1_40cm_3_scaffold_318197
Species: RBG_16_Bathyarchaeota_48_13_curated (100%)
1 1004 bp 53.49 6.13 99.80
13_1_40cm_3_scaffold_230686
Species: Candidatus Nitrososphaera gargensis (66.67%)
3 1225 bp 53.47 3.67 99.92
13_1_40cm_3_scaffold_66717
Species: RBG_13_Bathyarchaeota_38_9_curated (50%)
2 2222 bp 53.47 3.98 79.79
13_1_40cm_3_scaffold_163029
Domain: Archaea (66.67%)
3 1458 bp 53.43 6.38 75.31
13_1_40cm_3_scaffold_316490
Species: Candidatus Nitrososphaera gargensis (100%)
1 1009 bp 53.42 7.14 99.90
13_1_40cm_3_scaffold_203139
Species: Candidatus Nitrososphaera gargensis (100%)
1 1307 bp 53.40 4.48 99.85
13_1_40cm_3_scaffold_193463
Species: RBG_16_Archaea_50_20_curated (66.67%)
3 1562 bp 53.39 4.23 102.37
13_1_40cm_3_scaffold_75347
Species: Nitrososphaera viennensis (50%)
2 2101 bp 53.36 6.50 95.53
13_1_40cm_3_scaffold_178629
Species: Candidatus Nitrososphaera gargensis (50%)
2 1394 bp 53.30 3.87 52.30
13_1_40cm_3_scaffold_464283
Species: RBG_16_Archaea_50_20_curated (50%)
2 1175 bp 53.28 4.85 99.83
13_1_40cm_3_scaffold_148266
Species: RBG_16_Archaea_50_20_curated (100%)
1 1525 bp 53.25 3.74 51.93
13_1_40cm_3_scaffold_240277
Species: RBG_16_Archaea_50_20_curated (50%)
2 1200 bp 53.25 4.38 80.50
13_1_40cm_3_scaffold_130459
Species: Candidatus Nitrososphaera gargensis (100%)
1 1621 bp 53.24 6.48 99.94
13_1_40cm_3_scaffold_309026
Species: uncultured marine thaumarchaeote KM3_47_C08 (50%)
2 1030 bp 53.20 6.41 76.31
13_1_40cm_3_scaffold_275426
Species: RBG_16_Thaumarchaeota_49_8_curated (50%)
2 1118 bp 53.13 3.89 103.58
13_1_40cm_3_scaffold_55739
Species: Candidatus Nitrososphaera gargensis (100%)
2 2408 bp 53.11 4.73 56.19
13_1_40cm_3_scaffold_251772
Species: Nitrososphaera viennensis (50%)
2 1173 bp 53.11 4.09 90.79
13_1_40cm_3_scaffold_103922
Species: RBG_16_Archaea_50_20_curated (50%)
4 2448 bp 53.10 5.02 82.60
13_1_40cm_3_scaffold_55617
Species: Candidatus Nitrososphaera gargensis (50%)
4 2411 bp 53.09 5.79 85.98
13_1_40cm_3_scaffold_23790
Species: Candidatus Nitrososphaera gargensis (50%)
2 3481 bp 53.09 3.88 95.23
13_1_40cm_3_scaffold_312087
Species: RBG_16_Bathyarchaeota_57_9_curated (50%)
2 1867 bp 53.08 6.27 99.79
13_1_40cm_3_scaffold_243864
Species: RBG_13_Bathyarchaeota_46_16b_curated (50%)
2 1191 bp 53.06 5.29 98.24
13_1_40cm_3_scaffold_209829
Species: Candidatus Nitrososphaera gargensis (100%)
1 1286 bp 53.03 4.67 88.65
13_1_40cm_3_scaffold_127543
Species: Thermus sp. 2.9 (50%)
2 2380 bp 53.03 3.66 100.71
13_1_40cm_3_scaffold_156032
Species: Candidatus Nitrososphaera gargensis (50%)
2 1488 bp 53.02 4.03 31.85
13_1_40cm_3_scaffold_88794
Genus: Nitrososphaera (50%)
4 1947 bp 53.00 5.39 91.06
13_1_40cm_3_scaffold_38048
Species: RBG_16_Archaea_50_20_curated (50%)
2 2852 bp 52.98 5.73 75.95
13_1_40cm_3_scaffold_283621
Species: RBG_16_Thaumarchaeota_49_8_curated (100%)
1 1099 bp 52.96 6.28 99.91
13_1_40cm_3_scaffold_205967
Species: RBG_16_Archaea_50_20_curated (50%)
2 1634 bp 52.94 3.58 88.31
13_1_40cm_3_scaffold_266691
Species: Candidatus Nitrososphaera evergladensis (50%)
2 1138 bp 52.90 4.35 79.61
13_1_40cm_3_scaffold_316879
Species: Nitrososphaera viennensis (50%)
2 1008 bp 52.88 5.21 56.25
13_1_40cm_3_scaffold_262861
Species: RBG_13_Bathyarchaeota_38_9_curated (50%)
2 1509 bp 52.88 4.77 37.38
13_1_40cm_3_scaffold_201901
Species: RBG_16_Archaea_50_20_curated (50%)
2 1311 bp 52.86 6.86 100.23
Displaying items 1-50 of 370 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.