ggKbase home page

13_1_40cm_3_scaffold_30624_1

Organism: 13_1_40CM_3_Firmicutes_65_11

partial RP 27 / 55 MC: 5 BSCG 29 / 51 MC: 5 ASCG 6 / 38 MC: 1
Location: 2..364

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIU6_THEM7 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 130
  • Evalue 1.30e-27
translation initiation factor 3 (bIF-3) similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 130
  • Evalue 3.60e-28
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. I similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 130
  • Evalue 1.80e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermaerobacter marianensis → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 363
AAGAAAGAGAAAGATGGGCGCCGCAAGCACAACGTCATCAAGGTCAAAGAAATGAAACTCCGTCCCAAGATCGGCGAGCATGACTTCCAGACGAAGTTCCACGCTGTCAAGTCGTTCCTGGAAGAAGGCGACAAGGTCAAGCTCACCATCATGTTTCGTGGTCGCGAGATGGTGCACCAGGATATCGGCAAGCGGTTGCTGGAGCGGATGGCGCAAGAACTTAAGCCGATCAGCACCGTGGAGCGGATGCCGTTGCTGGAAGGCCGCAACATGATCATGATCCTGGCGCCGGCAGGCGCTGCGGCGGCGGCCGCTCAGGCTCCGCCCCCGCCGCCGCCTCAAGCCCAGGCAAGGAAGAGTTAG
PROTEIN sequence
Length: 121
KKEKDGRRKHNVIKVKEMKLRPKIGEHDFQTKFHAVKSFLEEGDKVKLTIMFRGREMVHQDIGKRLLERMAQELKPISTVERMPLLEGRNMIMILAPAGAAAAAAQAPPPPPPQAQARKS*