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13_1_40CM_3_Firmicutes_65_11

13_1_40CM_3_Bacteria_65_11
In projects: 13_1_40CM_3  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_40cm_3_UNK

Properties

Avg. coverage: 11.43 Longest contig: 8.28 Kbp Bin length: 398.30 Kbp GC content: 65.39 %
Contigs count: 186 Features count: 517 rRNAs count: 0 tRNAs count: 1

Genome completeness

partial RP 27 / 55 MC: 5 BSCG 29 / 51 MC: 5 ASCG 6 / 38 MC: 1
Displaying items 101-150 of 186 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_3_scaffold_294634
Species: Thermobacillus composti (50%)
2 1071 bp 65.17 11.76 98.04
13_1_40cm_3_scaffold_108285
Species: Desulfosporosinus acidiphilus (50%)
2 1773 bp 64.52 9.56 93.74
13_1_40cm_3_scaffold_250349
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)
2 1176 bp 64.97 12.37 93.88
13_1_40cm_3_scaffold_314971
Species: RBG_16_Euryarchaeota_67_27_curated (50%)
2 1013 bp 66.14 11.25 91.81
13_1_40cm_3_scaffold_139775
Species: Kyrpidia tusciae (50%)
2 2560 bp 65.20 11.60 79.80
13_1_40cm_3_scaffold_369868
Species: R_Acidobacteria_59_13 (50%)
2 1430 bp 67.62 12.17 69.65
13_1_40cm_3_scaffold_184150
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)
2 1373 bp 64.31 12.35 83.69
13_1_40cm_3_scaffold_300085
Species: RBG_16_Euryarchaeota_67_27_curated (100%)
2 1948 bp 67.71 9.86 100.10
13_1_40cm_3_scaffold_406691
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)
2 1257 bp 65.63 13.01 87.35
13_1_40cm_3_scaffold_309260
Species: Moorella thermoacetica (50%)
2 1029 bp 67.15 13.41 100.00
13_1_40cm_3_scaffold_279166
Species: Desmospora sp. 8437 (50%)
2 1110 bp 63.69 12.16 98.11
13_1_40cm_3_scaffold_54667
Species: BJP_08E140C01_Clostridiales_46_19 (50%)
2 2429 bp 64.68 13.28 95.84
13_1_40cm_3_scaffold_50615
Species: RBG_16_Euryarchaeota_68_13_curated (50%)
2 2515 bp 65.53 11.45 87.44
13_1_40cm_3_scaffold_306689
Species: Bacillus sp. 1NLA3E (50%)
2 1632 bp 64.77 12.59 90.99
13_1_40cm_3_scaffold_181924
Species: bacterium UASB270 (50%)
2 1381 bp 63.94 12.38 77.55
13_1_40cm_3_scaffold_214403
Species: Thermaerobacter marianensis (50%)
2 1271 bp 66.64 12.27 100.08
13_1_40cm_3_scaffold_157603
Species: Thermosediminibacter oceani (50%)
2 2185 bp 65.31 12.29 95.84
13_1_40cm_3_scaffold_221666
Species: R_Acidobacteria_59_13 (50%)
2 2465 bp 63.20 11.38 76.55
13_1_40cm_3_scaffold_64537
Species: Dehalobacter restrictus (50%)
2 2256 bp 67.51 11.10 89.23
13_1_40cm_3_scaffold_243434
Species: RBG_16_Euryarchaeota_67_27_curated (100%)
2 1193 bp 64.21 13.33 87.01
13_1_40cm_3_scaffold_290322
Species: RBG_16_Chloroflexi_57_9_curated (50%)
2 1082 bp 64.23 11.51 99.54
13_1_40cm_3_scaffold_107515
Species: Thermosinus carboxydivorans (50%)
2 1779 bp 67.45 12.23 96.63
13_1_40cm_3_scaffold_120482
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1684 bp 66.39 11.94 96.38
13_1_40cm_3_scaffold_30746
Species: Paenibacillus sp. JDR-2 (50%)
2 3882 bp 66.90 10.43 66.23
13_1_40cm_3_scaffold_47674
Species: Paenibacillus sp. VKM B-2647 (50%)
2 2973 bp 65.35 10.24 97.28
13_1_40cm_3_scaffold_39174
Species: Thermaerobacter subterraneus (50%)
2 2816 bp 66.83 11.03 81.18
13_1_40cm_3_scaffold_76478
Species: Moorella thermoacetica (50%)
2 3093 bp 64.69 13.29 97.67
13_1_40cm_3_scaffold_220380
Species: R_Acidobacteria_67_28 (50%)
2 2308 bp 63.65 9.75 69.54
13_1_40cm_3_scaffold_418501
Species: Thermaerobacter marianensis (50%)
2 1299 bp 63.36 13.28 74.60
13_1_40cm_3_scaffold_62314
Species: Symbiobacterium thermophilum (50%)
2 2292 bp 66.93 13.35 97.12
13_1_40cm_3_scaffold_91757
Species: CG_Anaero_02 (50%)
2 3735 bp 63.96 12.85 88.35
13_1_40cm_3_scaffold_80910
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)
2 2033 bp 64.54 13.13 88.39
13_1_40cm_3_scaffold_224519
Species: Pyrinomonas methylaliphatogenes (50%)
2 1242 bp 64.90 11.84 92.51
13_1_40cm_3_scaffold_170258
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)
2 1427 bp 66.15 9.57 100.07
13_1_40cm_3_scaffold_79583
Species: RBG_16_Euryarchaeota_67_27_curated (50%)
2 2273 bp 65.07 12.93 84.47
13_1_40cm_3_scaffold_125761
Species: Thermodesulfobium narugense (50%)
2 1649 bp 65.86 11.83 100.61
13_1_40cm_3_scaffold_122292
Species: Symbiobacterium thermophilum (50%)
2 2189 bp 68.66 10.83 86.34
13_1_40cm_3_scaffold_359892
Species: [Clostridium] symbiosum (50%)
2 1447 bp 67.38 11.20 100.14
13_1_40cm_3_scaffold_138469
Species: Moorella thermoacetica (50%)
2 2730 bp 67.95 10.77 100.00
13_1_40cm_3_scaffold_184456
Species: R_NC10_66_22 (100%)
2 1372 bp 68.66 9.73 99.49
13_1_40cm_3_scaffold_141731
Species: R_Acidobacteria_67_28 (50%)
2 1558 bp 64.38 11.75 95.70
13_1_40cm_3_scaffold_89673
Species: bacterium UASB270 (50%)
2 2494 bp 64.15 10.53 87.81
13_1_40cm_3_scaffold_203943
Species: Pyrinomonas methylaliphatogenes (50%)
2 2890 bp 64.19 10.33 79.52
13_1_40cm_3_scaffold_289466
Species: Cohnella sp. VKM B-2846 (50%)
2 1084 bp 67.80 11.62 101.57
13_1_40cm_3_scaffold_192166
Species: RBG_16_Armatimonadetes_67_12_curated (50%)
2 1344 bp 66.59 11.94 90.18
13_1_40cm_3_scaffold_190744
Species: Thermaerobacter subterraneus (50%)
2 1349 bp 64.27 9.79 78.28
13_1_40cm_3_scaffold_170073
Species: Moorella thermoacetica (50%)
2 1427 bp 63.35 10.72 100.07
13_1_40cm_3_scaffold_78187
Species: Lechevalieria aerocolonigenes (50%)
2 2064 bp 67.05 11.12 97.82
13_1_40cm_3_scaffold_149536
Species: Carboxydothermus hydrogenoformans (50%)
2 1519 bp 66.03 9.87 93.81
13_1_40cm_3_scaffold_304869
Species: GWC2_Clostridiales_40_7_curated (50%)
2 1042 bp 63.72 11.37 89.83
Displaying items 101-150 of 186 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.