ggKbase | organisms

13_1_40CM_3_Firmicutes_65_11

13_1_40CM_3_Bacteria_65_11

In projects: 13_1_40CM_3 | angelo_ncbi_2016 | meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_40cm_3_UNK

Properties

Avg. coverage: 11.43 Longest contig: 8.28 Kbp Bin length: 398.30 Kbp GC content: 65.39 %

Contigs count: 186 Features count: 517 rRNAs count: 0 tRNAs count: 1

Genome completeness

partial RP 27 / 55 MC: 5 BSCG 29 / 51 MC: 5 ASCG 6 / 38 MC: 1

Displaying items 101-150 of 186 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_3_scaffold_294634 Species: Thermobacillus composti (50%)	2	1071 bp	65.17	11.76	98.04
13_1_40cm_3_scaffold_108285 Species: Desulfosporosinus acidiphilus (50%)	2	1773 bp	64.52	9.56	93.74
13_1_40cm_3_scaffold_250349 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1176 bp	64.97	12.37	93.88
13_1_40cm_3_scaffold_314971 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1013 bp	66.14	11.25	91.81
13_1_40cm_3_scaffold_139775 Species: Kyrpidia tusciae (50%)	2	2560 bp	65.20	11.60	79.80
13_1_40cm_3_scaffold_369868 Species: R_Acidobacteria_59_13 (50%)	2	1430 bp	67.62	12.17	69.65
13_1_40cm_3_scaffold_184150 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1373 bp	64.31	12.35	83.69
13_1_40cm_3_scaffold_300085 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1948 bp	67.71	9.86	100.10
13_1_40cm_3_scaffold_406691 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1257 bp	65.63	13.01	87.35
13_1_40cm_3_scaffold_309260 Species: Moorella thermoacetica (50%)	2	1029 bp	67.15	13.41	100.00
13_1_40cm_3_scaffold_279166 Species: Desmospora sp. 8437 (50%)	2	1110 bp	63.69	12.16	98.11
13_1_40cm_3_scaffold_54667 Species: BJP_08E140C01_Clostridiales_46_19 (50%)	2	2429 bp	64.68	13.28	95.84
13_1_40cm_3_scaffold_50615 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	2515 bp	65.53	11.45	87.44
13_1_40cm_3_scaffold_306689 Species: Bacillus sp. 1NLA3E (50%)	2	1632 bp	64.77	12.59	90.99
13_1_40cm_3_scaffold_181924 Species: bacterium UASB270 (50%)	2	1381 bp	63.94	12.38	77.55
13_1_40cm_3_scaffold_214403 Species: Thermaerobacter marianensis (50%)	2	1271 bp	66.64	12.27	100.08
13_1_40cm_3_scaffold_157603 Species: Thermosediminibacter oceani (50%)	2	2185 bp	65.31	12.29	95.84
13_1_40cm_3_scaffold_221666 Species: R_Acidobacteria_59_13 (50%)	2	2465 bp	63.20	11.38	76.55
13_1_40cm_3_scaffold_64537 Species: Dehalobacter restrictus (50%)	2	2256 bp	67.51	11.10	89.23
13_1_40cm_3_scaffold_243434 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1193 bp	64.21	13.33	87.01
13_1_40cm_3_scaffold_290322 Species: RBG_16_Chloroflexi_57_9_curated (50%)	2	1082 bp	64.23	11.51	99.54
13_1_40cm_3_scaffold_107515 Species: Thermosinus carboxydivorans (50%)	2	1779 bp	67.45	12.23	96.63
13_1_40cm_3_scaffold_120482 Species: RLO_Gemmatimonadetes_68_9 (50%)	2	1684 bp	66.39	11.94	96.38
13_1_40cm_3_scaffold_30746 Species: Paenibacillus sp. JDR-2 (50%)	2	3882 bp	66.90	10.43	66.23
13_1_40cm_3_scaffold_47674 Species: Paenibacillus sp. VKM B-2647 (50%)	2	2973 bp	65.35	10.24	97.28
13_1_40cm_3_scaffold_39174 Species: Thermaerobacter subterraneus (50%)	2	2816 bp	66.83	11.03	81.18
13_1_40cm_3_scaffold_76478 Species: Moorella thermoacetica (50%)	2	3093 bp	64.69	13.29	97.67
13_1_40cm_3_scaffold_220380 Species: R_Acidobacteria_67_28 (50%)	2	2308 bp	63.65	9.75	69.54
13_1_40cm_3_scaffold_418501 Species: Thermaerobacter marianensis (50%)	2	1299 bp	63.36	13.28	74.60
13_1_40cm_3_scaffold_62314 Species: Symbiobacterium thermophilum (50%)	2	2292 bp	66.93	13.35	97.12
13_1_40cm_3_scaffold_91757 Species: CG_Anaero_02 (50%)	2	3735 bp	63.96	12.85	88.35
13_1_40cm_3_scaffold_80910 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2033 bp	64.54	13.13	88.39
13_1_40cm_3_scaffold_224519 Species: Pyrinomonas methylaliphatogenes (50%)	2	1242 bp	64.90	11.84	92.51
13_1_40cm_3_scaffold_170258 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1427 bp	66.15	9.57	100.07
13_1_40cm_3_scaffold_79583 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2273 bp	65.07	12.93	84.47
13_1_40cm_3_scaffold_125761 Species: Thermodesulfobium narugense (50%)	2	1649 bp	65.86	11.83	100.61
13_1_40cm_3_scaffold_122292 Species: Symbiobacterium thermophilum (50%)	2	2189 bp	68.66	10.83	86.34
13_1_40cm_3_scaffold_359892 Species: [Clostridium] symbiosum (50%)	2	1447 bp	67.38	11.20	100.14
13_1_40cm_3_scaffold_138469 Species: Moorella thermoacetica (50%)	2	2730 bp	67.95	10.77	100.00
13_1_40cm_3_scaffold_184456 Species: R_NC10_66_22 (100%)	2	1372 bp	68.66	9.73	99.49
13_1_40cm_3_scaffold_141731 Species: R_Acidobacteria_67_28 (50%)	2	1558 bp	64.38	11.75	95.70
13_1_40cm_3_scaffold_89673 Species: bacterium UASB270 (50%)	2	2494 bp	64.15	10.53	87.81
13_1_40cm_3_scaffold_203943 Species: Pyrinomonas methylaliphatogenes (50%)	2	2890 bp	64.19	10.33	79.52
13_1_40cm_3_scaffold_289466 Species: Cohnella sp. VKM B-2846 (50%)	2	1084 bp	67.80	11.62	101.57
13_1_40cm_3_scaffold_192166 Species: RBG_16_Armatimonadetes_67_12_curated (50%)	2	1344 bp	66.59	11.94	90.18
13_1_40cm_3_scaffold_190744 Species: Thermaerobacter subterraneus (50%)	2	1349 bp	64.27	9.79	78.28
13_1_40cm_3_scaffold_170073 Species: Moorella thermoacetica (50%)	2	1427 bp	63.35	10.72	100.07
13_1_40cm_3_scaffold_78187 Species: Lechevalieria aerocolonigenes (50%)	2	2064 bp	67.05	11.12	97.82
13_1_40cm_3_scaffold_149536 Species: Carboxydothermus hydrogenoformans (50%)	2	1519 bp	66.03	9.87	93.81
13_1_40cm_3_scaffold_304869 Species: GWC2_Clostridiales_40_7_curated (50%)	2	1042 bp	63.72	11.37	89.83

Displaying items 101-150 of 186 in total

13_1_40CM_3_Firmicutes_65_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_3_Firmicutes_65_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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