ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_3_UNK

Properties

Avg. coverage: 11.22 Longest contig: 27.37 Kbp Bin length: 26.64 Mbp GC content: 62.56 %

Contigs count: 13027 Features count: 36085 rRNAs count: 0 tRNAs count: 219

Genome completeness

megabin RP 34 / 55 MC: 31 BSCG 25 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 301-350 of 13027 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_3_scaffold_114579 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1725 bp	64.41	3.57	100.87
13_1_40cm_3_scaffold_316436 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1380 bp	64.06	9.78	100.87
13_1_40cm_3_scaffold_258833 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1157 bp	53.93	7.65	100.86
13_1_40cm_3_scaffold_258635 Species: Methanocaldococcus sp. FS406-22 (50%)	2	1157 bp	53.41	1.30	100.86
13_1_40cm_3_scaffold_302151 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1050 bp	66.95	11.43	100.86
13_1_40cm_3_scaffold_96941 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	4	1868 bp	67.13	2.89	100.86
13_1_40cm_3_scaffold_172897 Species: BJP_IG2069_Methanobacteriales_33_27 (50%)	2	1416 bp	55.79	2.97	100.85
13_1_40cm_3_scaffold_244336 Species: Thermococcus onnurineus (50%)	2	1190 bp	59.75	2.65	100.84
13_1_40cm_3_scaffold_294422 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1071 bp	66.57	3.08	100.84
13_1_40cm_3_scaffold_313929 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1675 bp	64.60	12.54	100.84
13_1_40cm_3_scaffold_118775 Phylum: Euryarchaeota (100%)	3	1696 bp	67.10	9.38	100.83
13_1_40cm_3_scaffold_87814 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	4	1957 bp	65.87	4.06	100.82
13_1_40cm_3_scaffold_111722 Phylum: Euryarchaeota (66.67%)	3	1747 bp	66.86	25.59	100.80
13_1_40cm_3_scaffold_220492 Species: Methanobacterium formicicum (50%)	2	1253 bp	66.80	3.35	100.80
13_1_40cm_3_scaffold_128730 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1631 bp	59.10	23.45	100.80
13_1_40cm_3_scaffold_21404 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (60%)	5	3643 bp	63.77	37.06	100.80
13_1_40cm_3_scaffold_124706 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	2771 bp	61.35	7.85	100.79
13_1_40cm_3_scaffold_266121 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1140 bp	67.02	4.34	100.79
13_1_40cm_3_scaffold_575304 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1146 bp	62.74	24.35	100.79
13_1_40cm_3_scaffold_210603 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1283 bp	62.20	12.86	100.78
13_1_40cm_3_scaffold_210632 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1283 bp	62.74	18.94	100.78
13_1_40cm_3_scaffold_104064 Phylum: Euryarchaeota (66.67%)	3	1807 bp	66.08	2.82	100.77
13_1_40cm_3_scaffold_305980 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1039 bp	65.83	9.96	100.77
13_1_40cm_3_scaffold_244159 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1191 bp	53.99	2.90	100.76
13_1_40cm_3_scaffold_481987 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1066 bp	65.48	11.68	100.75
13_1_40cm_3_scaffold_364421 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1736 bp	67.80	3.46	100.75
13_1_40cm_3_scaffold_290882 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1081 bp	61.15	31.91	100.74
13_1_40cm_3_scaffold_468133 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1221 bp	62.82	38.21	100.74
13_1_40cm_3_scaffold_288338 Species: Thermoplasmatales archaeon I-plasma (50%)	2	1087 bp	63.57	4.00	100.74
13_1_40cm_3_scaffold_231013 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1224 bp	64.38	5.76	100.74
13_1_40cm_3_scaffold_184987 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1370 bp	66.79	22.12	100.73
13_1_40cm_3_scaffold_91639 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1918 bp	70.91	2.50	100.73
13_1_40cm_3_scaffold_459398 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	4	1233 bp	65.45	37.23	100.73
13_1_40cm_3_scaffold_118978 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	3297 bp	65.36	4.78	100.73
13_1_40cm_3_scaffold_381194 Species: Aciduliprofundum sp. MAR08-339 (50%)	2	1534 bp	58.41	23.57	100.72
13_1_40cm_3_scaffold_247187 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	2392 bp	65.43	11.16	100.71
13_1_40cm_3_scaffold_213152 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1275 bp	64.31	11.18	100.71
13_1_40cm_3_scaffold_139896 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1567 bp	64.90	6.80	100.70
13_1_40cm_3_scaffold_318466 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1004 bp	59.66	31.82	100.70
13_1_40cm_3_scaffold_206403 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1296 bp	65.82	14.93	100.69
13_1_40cm_3_scaffold_136563 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1585 bp	66.12	3.60	100.69
13_1_40cm_3_scaffold_238216 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	1880 bp	67.13	3.19	100.69
13_1_40cm_3_scaffold_314074 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1016 bp	60.53	6.94	100.69
13_1_40cm_3_scaffold_188973 Species: Methanoregula boonei (50%)	2	1764 bp	55.73	9.18	100.68
13_1_40cm_3_scaffold_197436 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1326 bp	62.90	9.95	100.68
13_1_40cm_3_scaffold_403360 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1782 bp	61.50	40.57	100.67
13_1_40cm_3_scaffold_242479 Species: Haloterrigena salina (50%)	2	1195 bp	65.19	1.88	100.67
13_1_40cm_3_scaffold_241087 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1198 bp	63.77	4.01	100.67
13_1_40cm_3_scaffold_86884 Phylum: Euryarchaeota (80%)	5	1967 bp	62.53	3.28	100.66
13_1_40cm_3_scaffold_86087 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	4	1976 bp	64.98	4.18	100.66

Displaying items 301-350 of 13027 in total

13_1_40CM_3_Euryarchaeota_megabin_63_11

13_1_40CM_3_Euryarchaeota_63_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_3_Euryarchaeota_megabin_63_11

13_1_40CM_3_Euryarchaeota_63_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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