ggKbase home page

13_1_40cm_4_scaffold_4304_39

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 42765..43901

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 410.0
  • Bit_score: 484
  • Evalue 1.20e-133
RNA-splicing ligase RtcB n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EL00_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 423.0
  • Bit_score: 439
  • Evalue 3.10e-120
protein of unknown function UPF0027 similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 410.0
  • Bit_score: 484
  • Evalue 2.40e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1137
GTGCCCCAGCCTGCCATTTTTGGTACCCACGAAGAAAAGACCCTCGCCCAGCTGCGGGACGTGGCGACGCGGGCCGAGCGCGTGGCGCTCATGGCCGACGGCCATCTGGGCTACATCATGCCGATAGGCGGCGTGGCGGCGTATCGCAATAAAGTGAGCGTCGTGGGCGTGGGCTTTGACATCGCCTGCGGCAACGCCGCGATCCGCACCGACCGCCGCGGCGACGACTTCCCCCGGCCCGAGCTCGAGCGCCTGGCGGACGAGATTCAGCGCACGATCTCATTCGGCATCGGGCGCTCGAACCGCGCCGACGACGCGCCCACCGACCATGTCCTGTTTGAGCACCCCGCCTGGGATGCCGTCCCCGGACGCCACGAGCGCGATGGCCTCCGCGCCAAGGCGCGCAACCAGCTCGGCACGGTCGGGAGCGGCAACCACTATGTGGACGTGTTCGCCGACGAAACCGGGGACATCTGGGTGGGCGTGCACTTCGGCAGCCGCGGGCCGGAGGCAGAGGCGCTGTTCGCGCTCGACCAGCCGCTTGGACACGACTACTGGCACTTGATGACGCTCGCCGGCGAGTACGCCTACGCGGGGCGCGAGTGGGTGGCGCGCAAGGTGGTGTCGCTGCTCGGCGGTCGGGAGCTCGAGCTGGTCCACAATCACCACAACTTCGCGTGGAAGGAGACCCACGACGGGACGGAGTACGTCGTGGTGCGCAAGGGAGCGACGCCGGCGTTTCCGGGGCAAAAGGGGTTCGTCGGTGGCTCGATGGGAGACGACGCGGTCATCATCGAGGGTGCCCGACACGACTCCCCGCTGCAGCGGGCGTCGCTCTACTCCACGGTGCACGGCGCGGGTCGCGTGATGTCGCGCACGGAGGCGCGCGGCAAGATCAACCGCCGCACCGGCGAGCTGATCCGGCCCGGCCGGGTCACGTGGGACATGCTGCGGTCGTGGATCGGTGGGAAGGGTGTGATCCTGCGCGGCGGCGGGCTGGACGAGTCGCCGCACGCCTATCGCCGGCTGCCGGACGTGCTGGCGGCGCAGGGCGACACCGTCACGGTGGTGCACACGCTCACGCCCTTGATCGTGGTGATGGCGGGGGAGAAGGAGTTCGATCCGTACAAGGACTAG
PROTEIN sequence
Length: 379
VPQPAIFGTHEEKTLAQLRDVATRAERVALMADGHLGYIMPIGGVAAYRNKVSVVGVGFDIACGNAAIRTDRRGDDFPRPELERLADEIQRTISFGIGRSNRADDAPTDHVLFEHPAWDAVPGRHERDGLRAKARNQLGTVGSGNHYVDVFADETGDIWVGVHFGSRGPEAEALFALDQPLGHDYWHLMTLAGEYAYAGREWVARKVVSLLGGRELELVHNHHNFAWKETHDGTEYVVVRKGATPAFPGQKGFVGGSMGDDAVIIEGARHDSPLQRASLYSTVHGAGRVMSRTEARGKINRRTGELIRPGRVTWDMLRSWIGGKGVILRGGGLDESPHAYRRLPDVLAAQGDTVTVVHTLTPLIVVMAGEKEFDPYKD*