ggKbase home page

13_1_40cm_4_scaffold_430_17

Organism: 13_1_40CM_4_Thaumarchaeota_48_7

partial RP 25 / 55 BSCG 16 / 51 MC: 1 ASCG 28 / 38
Location: comp(14020..15453)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDJ5_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 452.0
  • Bit_score: 421
  • Evalue 8.40e-115
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 475.0
  • Bit_score: 451
  • Evalue 2.20e-124
Arabinose efflux permease family protein {ECO:0000313|EMBL:AIF83025.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 475.0
  • Bit_score: 451
  • Evalue 1.10e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1434
GTGCTCGCGGTTCTGAGTAGCATTGCAACCATGGTAATGTACGCTGAGACTATGCTGATCCCGGCAATTCCCGATCTTATTCGGGAATTCAATGTCTCGTACAGCACTTCATCTTGGATACTGACAGCATATCTCGTCCCCGGTGCAGTCATGATGCCTGTTGCCGGCAAGCTGTCAGACATCTATGGAAAAAAGAATGTACTTTTGACCATTATGGCGATCTATGTTGTCGGCATTACTATTGCAGGGTTTTCAACAAGCATCTACATGCTATTCATTGCAAGGGCCATTCAGGGTATCGGGATGGCCATGTTTGTAATTGCATTTGGCATAATCCGTGACCAGTTTCCAAGGGAAAAGATCTCGATAGGTCAGGGCGTCATTTCGTCAATGTTTGCCTCTGGCGCGGTGATAGGCCTGCTTGCCGGCGGCATAATCATAAACAATTATGGTTGGCATGCCACATTTTTCTCCACGATACCAGTTGCAGTCGCGCTGTTTGTCGTAATCTGGCGTTTCAACTACGAACGCAAAATGGAGCCATGGGAGCAAGCACCTGAAAGGATACCTGCAGCAAATATCCCAAAGGGTGTAGACGTCAAGGGAGCAATTGCACTGGCGACTTTTGTCACTTCATTTCTGTTGGCATTGACTCTTTTTGAGACCGGGAGCGCAGGGTTACAGTCTGCAGTACAGATCGCGATTTTCATAGCTACCGGGGCTGTGGCCCTAGTACTATTCATTTTGATAGAGAAGCGCGCGAAGGTCCCCTTGGTTGATCTAAAACTTATGGCTCACAAGGCGATACTGCCGGCCAACCTGATAATCATGATAGTAGGCTTTTCGATGTTCATGGTTTTTCAGACGATACCAGTTCTTGTGCGTAATCCACATCCACTTGGCTTTGGAGGCGATGCTGCAATGGCCGGGTACGTGCAGCTTCCATTCGCACTCGTGCTTCTTGTGTTCGGCCCAACATCCGGCCTAATTGTTGAAAGGCTTGGGTCCGTCAGACCCATAATCATCGGCACTTCGATAACTACAACTGGGTTCCTTTTCCTGCTCACATTCCACAACGACTGGGTGTCAGTTGCTGCGAGCCTTGCGGTGCTGTCTACAGGACTGTCACTTACAAACGTTGGGGCGCTGAACGTCACGATACTTGCCACGCCTGCTCAATTCATGGGCATGTCGGTTGGAATGAACACACTTCTGCGAATCGTTGGGGCCTCTGTTGGACCAGCCCTTGCCGGAGTCTATATGCAGACGTACCAGTCTACAATAGAGGTGGCGAATAGGCCAACGGCATTCCCCTCTATGCAGGCGTACAGTGCGATATTTCTTACAGCCGTGATATTGTCAGTCGTGTCAGTCATGTTGGCTGTCTTCTTGAAGCGTCGGCTGAACAAGATGTCGATACCGAACCTCGCGTAA
PROTEIN sequence
Length: 478
VLAVLSSIATMVMYAETMLIPAIPDLIREFNVSYSTSSWILTAYLVPGAVMMPVAGKLSDIYGKKNVLLTIMAIYVVGITIAGFSTSIYMLFIARAIQGIGMAMFVIAFGIIRDQFPREKISIGQGVISSMFASGAVIGLLAGGIIINNYGWHATFFSTIPVAVALFVVIWRFNYERKMEPWEQAPERIPAANIPKGVDVKGAIALATFVTSFLLALTLFETGSAGLQSAVQIAIFIATGAVALVLFILIEKRAKVPLVDLKLMAHKAILPANLIIMIVGFSMFMVFQTIPVLVRNPHPLGFGGDAAMAGYVQLPFALVLLVFGPTSGLIVERLGSVRPIIIGTSITTTGFLFLLTFHNDWVSVAASLAVLSTGLSLTNVGALNVTILATPAQFMGMSVGMNTLLRIVGASVGPALAGVYMQTYQSTIEVANRPTAFPSMQAYSAIFLTAVILSVVSVMLAVFLKRRLNKMSIPNLA*