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13_1_40cm_4_scaffold_109_6

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 2737..3435

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 230.0
  • Bit_score: 253
  • Evalue 2.10e-64
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 220
  • Evalue 2.40e-54
transcriptional regulatory protein ompR similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 157.0
  • Bit_score: 82
  • Evalue 1.70e-13

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCGGGTGCTCGTCATCGAGGACGAACAGGACGTCAGCGCCGTCTTCCGCGACTTCCTGCTCGAGTTGGGACACGAGCCCGTCCTCGTCCGGAGCGCCGAAGCGGCGCTGAACAAGCTCGAGACCGAACGCCCCGACGCGATCATCCTCGACATCCACCTGCCCGGTCTCTCCGGCCTCGACTTCCTCCAGCTCCGCCCCGTTCGTGACTCCGGCCTGCCCATCGTCGCCGTCTCCGGCGTCGTCACCGAGAGTCAGGCGCGCGAGTGCCTCCGCCTCGGCGCGATCGACTTCGTCGGCAAGCCGGTGCCGTTCGAGCGCTTGGGGCAGGTGCTGGCCTTCATCGAGCCTCACGCGCTCCACCGGCAGATCGCCGTCGCCGGCCAGGGTCCCGAGCGCCGGCGCGGGTCGCGGGTGCGCGTGACGTTTCCGGTGCGCCTCGTGCAATACGACGGCAGCGAGTGGGACGGCTGGGCCGCCGACGTGAGCCCCTTCGGGATCCGGGTCCGCACCAACGCGTCGATCAGCTCGGGCACGGCGGCGAACCTCTCGTTCACGCTCCCGGACGGCAAGGGCCCGCTGCGGGTGATGTCGCTGCACGTGCGCGCCGACGACGACGGGCACGCCTTCTACTTCATGAACCTCACCGCCGAAGACTTCGAGCGCCTCACCGACTTCGCGCGCCGGCTGCCGACCTAG
PROTEIN sequence
Length: 233
MRVLVIEDEQDVSAVFRDFLLELGHEPVLVRSAEAALNKLETERPDAIILDIHLPGLSGLDFLQLRPVRDSGLPIVAVSGVVTESQARECLRLGAIDFVGKPVPFERLGQVLAFIEPHALHRQIAVAGQGPERRRGSRVRVTFPVRLVQYDGSEWDGWAADVSPFGIRVRTNASISSGTAANLSFTLPDGKGPLRVMSLHVRADDDGHAFYFMNLTAEDFERLTDFARRLPT*