ggKbase home page

13_1_40cm_4_scaffold_444_29

Organism: 13_1_40CM_4_Chloroflexi_52_4

partial RP 20 / 55 MC: 1 BSCG 23 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(27171..27755)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=485913 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 187.0
  • Bit_score: 188
  • Evalue 1.20e-44
2'-5' RNA ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJ40_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 187.0
  • Bit_score: 188
  • Evalue 8.40e-45
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 187.0
  • Bit_score: 113
  • Evalue 9.60e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 585
ATGACACGTACATTTATTGCTCTTGAACTAGATGAACCCCTGCAACGCTACCTTGGCCGAATAATTCGCCGGATGGCGCAGGAGTTACCCAGTCTGAGTTGGGTTGATCTTGCGGGGATTCATCTTACCCTCGCCTTCCTCGGCGAATTAAGCGATGAGCAGTTATCTGCAGCTATCTCCGCGGCTGAACTCGCCGCGCGCAGGGTTTCATCCTTCGATATTCGCCTCTCTCTTCCAGATATCTTTGGCACACAGCGACAGCCTCGTGTCATCTGGATGGGTGTTGACGAACCATCCGGCAAGCTCCAACAACTCCAGCAACAATTGAATCTGGAGCTTGCGCAGCGTGGTTTCGAGGTCGATAAGCGTCCCTTCACACCGCACCTGACCTTATCGCGCATCAAAGCGCCTCTCAACGCAGAAGAACAACAACGCTTGCAACGAATACTCACTGTCAAAGACCGCCAGCCATCTTCTCCCATAAAACATGTTTCCCAGATATCCGTGATGAAAAGCGAGCTTTCCCGCGTGGGAGCAAAGTATACATGTTTACGTAATGTTGATCTTGGCCTAACTACGTCGTAG
PROTEIN sequence
Length: 195
MTRTFIALELDEPLQRYLGRIIRRMAQELPSLSWVDLAGIHLTLAFLGELSDEQLSAAISAAELAARRVSSFDIRLSLPDIFGTQRQPRVIWMGVDEPSGKLQQLQQQLNLELAQRGFEVDKRPFTPHLTLSRIKAPLNAEEQQRLQRILTVKDRQPSSPIKHVSQISVMKSELSRVGAKYTCLRNVDLGLTTS*