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13_1_40cm_4_scaffold_4284_4

Organism: 13_1_40CM_4_Acidobacteria_69_4

partial RP 15 / 55 BSCG 19 / 51 ASCG 7 / 38
Location: comp(4738..5712)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFE5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 306.0
  • Bit_score: 291
  • Evalue 1.20e-75
two component sigma54 specific Fis family transcriptional regulator; K07715 two-component system, NtrC family, response regulator GlrR Tax=RBG_13_RIF03_48_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 315.0
  • Bit_score: 321
  • Evalue 1.50e-84
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 306.0
  • Bit_score: 291
  • Evalue 3.30e-76

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Taxonomy

RBG_13_RIF03_48_7_curated → RIF3 → Bacteria

Sequences

DNA sequence
Length: 975
ATGGCCGGCTCGGCGGGCCGTGAGTGGTCGAAAGAGATCGTGCCGGAGGAGCCCGTCCATCCGGCCAGGCGCCGGACCGATCTCATCGTCGGCGGCAGCGCCGCCATGGCGCGCGTGTTCGAGCTGATCGCGGTCGGTACCGGCAAGGAGCTGGTGGCCCGGGCCATCCATTACACCGGGCCGCGGGCGGCCCGGCCGTTCCTGACCATGAACTGCGGCGCGATCCCCGAGGCTCTGATGGAGGACGAGCTGTTCGGCCACACACGCGGGGCCTACACCGGGGCGCACGCCGACAAGCGCGGCGTCTTCGAAGAAGCGGAGGGTGGCAGCCTGTTCCTGGACGAGATCGCCGACCTCTACCCGTCCTGCCAGGTGAAGCTGTTGCGTGTCCTGCAGGAGCGGGAAGTGCGGCGGATCGGCGAGACCAGGACACGCAGGGTGGACGTGCGGATCATCGCGGCCACCAACAAGGACCTCAAGTCCGAGATGGACGCCCGGCGTTTCCGCGAGGACCTGTACCACCGCATCCACGTGCTGCCGATCGTCCTGCCGCCCCTGCGGGAGAGACGCGAGGACGTGCCGCTGCTGGTGGGACAGTTCGTCCGCCAGTTCAACCACGAGCTGGGACGATCGATCAAGGGGTTTTCGCCCGCGGCGATGGAGAGGCTCAAGACGCACCCGTGGCCCGGCAATGTGCGCGAGCTCGAGAACCGCGTCAAGCAGGCGATGGTCATGGCCAAGGCAGACACCATCGAGGTCGAGTCCCTCGAGTTGTTCTCCGGGCAGCCGGCGGGGGCCGGGATCTCTCCGTTCCGCAAGGCGAAGGAGGAGTTCGTCAGGAACTACCTGGTCCAGTGCCTGCGCGCCGCCGGTGGAAACGTCGCGGCGGCGGCGCGCCTGGCCGGCAAGGACCGCAAGGACCTCTACGATCTGATGAAGAAACACCACGTCGACCCGGGCGACTACCGGCCCTGA
PROTEIN sequence
Length: 325
MAGSAGREWSKEIVPEEPVHPARRRTDLIVGGSAAMARVFELIAVGTGKELVARAIHYTGPRAARPFLTMNCGAIPEALMEDELFGHTRGAYTGAHADKRGVFEEAEGGSLFLDEIADLYPSCQVKLLRVLQEREVRRIGETRTRRVDVRIIAATNKDLKSEMDARRFREDLYHRIHVLPIVLPPLRERREDVPLLVGQFVRQFNHELGRSIKGFSPAAMERLKTHPWPGNVRELENRVKQAMVMAKADTIEVESLELFSGQPAGAGISPFRKAKEEFVRNYLVQCLRAAGGNVAAAARLAGKDRKDLYDLMKKHHVDPGDYRP*