ggKbase home page

13_1_40cm_4_scaffold_116_10

Organism: 13_1_40CM_4_Euryarchaeota_megabin_63_12

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38
Location: 10562..12106

Top 3 Functional Annotations

Value Algorithm Source
Oligosaccharide repeat unit transporter n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXP1_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 24.2
  • Coverage: 417.0
  • Bit_score: 146
  • Evalue 5.60e-32
Polysaccharide biosynthesis related protein {ECO:0000313|EMBL:AKB71735.1}; TaxID=1434113 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 24.0
  • Coverage: 408.0
  • Bit_score: 148
  • Evalue 3.60e-32
oligosaccharide repeat-containing polymerase similarity KEGG
DB: KEGG
  • Identity: 24.2
  • Coverage: 417.0
  • Bit_score: 146
  • Evalue 1.60e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina mazei → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1545
GTGAGTGACTTTAATAGGAGAATTGATACGCGGCGCGGGATCAGAATCGCAGCGCGGATAGAGGCTCAGCCGGAAGCACGCCCCCTTGCTCCTTCTGAACGGCATAGGTTGATTCGCGGGACTTCCTGGACACTCGTCTCAACGGTTGTGGGGGTAGTCATCGCGGTGGTCTCGCAACCTATCCTCGTGGCGTTTGTTGGCGTCGATGGTTATGGAGTGTGGGCGTCGACAATCGCCATCGCATCGCTGTTCAGCCTTGGCGGCGACCTTGGTGTGTCGAGTGCGCTGCCGAAGCTCATTGCGGAGCGGAGAGGAGGGGGACAAGACGAGGGGACACTCGCGGGCAGCGCCCTTCTTTTTGCCTTGTTTACAGGCAGCATTGCCGCGGGGGCGTTGGCCCTGTGTGCCCCGCTCGTGGCCGGCTTCGTAAATTTTCCCAACCTCACGCTTCTCCTTCGAATCCAGTCGCTCCAGATGCCCTTCAACTTCGCGTTGGGATCCCTTCTTGCCCTCCTTCAAGGCGGGAGAAATTTCCGAGCCTACTCGCTTGCGGCGACGACACTCGCTGTCGCGAACCTGACCCTGATGGCGGTCTTCCTTCTCTTGGGCACCGGCCTCCCCGGAGTGATCGCAGCATCTCTCTTAGCGACAGTTGGCGTGTTTGCCCTGATGATCTTCGTTTATCGGAAGAGCGTTCCGTTCCAGGGTCTCTCCGCGTTCAGGAGAGACATTGCGCTGCTGGTACCATTCGGTGTCCAATTGACGCTGTCGATTATCCTGAGTCAGATCATGTATCAAATCGACTTGGTACTTCTTTCGTTGTGGCTTCGGGACCCGCACGTTGTCGGAATGTATGCACTTGGGGTTTTCGTCACGAGACTTTTGTGGATCATCCCCGGAGGGATCAGCCTCACGACCTATCCGGTAGTCTCGCAGTACTCGGCAGGGCGAGACAATCGACGACTCTCCGCCTATATCCGCACGGTGCTTGTTGGGTCCATAGCAATTACCGGAGTCCTTGCCGCTGGGATTATTCTTCTTGGAAGACCCGCCCTGAGGATCGCCTTCGGATCCGATGCCGTCCCGTCCTACGCGCTCTGTCTCGCTCTGCTACCAGGGGCAGCTGCTCTCGGGAGCGTTCGGTCCATTGCGCCGGCAATTCCCGGTGCCGGACGGCCAGATGTGGCCGCGTGGATATCCGGGGCTGGCGCTGCCCTCACGTTACTCCTTTGCCTGCTGCTCACCGCGGCCGTAGGGGCCGTGGGTACGGCAATCGGTGTCTCTGCCTCGTTCGTTTTCGTGAGCCTGGCTCTGATTTGGGCAACTCAAAAGTTCGTCGTTCGGGCGGAAGCTCGGGGGTCCACTTTTCGGAGGGCCTTGCCGGTGGCACTCGGAGTCGTTGTCTTCTGTCTAGCTGCTGTCCCGTTCGCCGCGGCCGAAACAGATTCGAGAAGTCCCTTGATCGCTGCCCTTGTTTGGTTCGGAGGTTCTGGCCTGTTGCTTCTTATCGTAGGTAGAAAGGCGCTGAGGCAGAAGCTCAGCTGA
PROTEIN sequence
Length: 515
VSDFNRRIDTRRGIRIAARIEAQPEARPLAPSERHRLIRGTSWTLVSTVVGVVIAVVSQPILVAFVGVDGYGVWASTIAIASLFSLGGDLGVSSALPKLIAERRGGGQDEGTLAGSALLFALFTGSIAAGALALCAPLVAGFVNFPNLTLLLRIQSLQMPFNFALGSLLALLQGGRNFRAYSLAATTLAVANLTLMAVFLLLGTGLPGVIAASLLATVGVFALMIFVYRKSVPFQGLSAFRRDIALLVPFGVQLTLSIILSQIMYQIDLVLLSLWLRDPHVVGMYALGVFVTRLLWIIPGGISLTTYPVVSQYSAGRDNRRLSAYIRTVLVGSIAITGVLAAGIILLGRPALRIAFGSDAVPSYALCLALLPGAAALGSVRSIAPAIPGAGRPDVAAWISGAGAALTLLLCLLLTAAVGAVGTAIGVSASFVFVSLALIWATQKFVVRAEARGSTFRRALPVALGVVVFCLAAVPFAAAETDSRSPLIAALVWFGGSGLLLLIVGRKALRQKLS*