ggKbase home page

13_2_20cm_scaffold_1070_12

Organism: 13_2_20CM_Gemmatimonadetes_69_27

partial RP 20 / 55 MC: 1 BSCG 21 / 51 ASCG 7 / 38
Location: 11975..15007

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7U1_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 999.99
  • Bit_score: 728
  • Evalue 6.80e-207
  • rbh
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB56655.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 999.99
  • Bit_score: 733
  • Evalue 5.10e-208
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 999.99
  • Bit_score: 678
  • Evalue 2.30e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3033
ATGAGAACAATTCGTGTCTGTCTGATCGGCTGCGCCGCGTTGCTCGCGGCGGCCGGGGGCGCCACGGCCCAGGATTCCAGCGGCGCGATCGCGGGCGTGGTGCGGGCGCGCGATACGGGGACCCCGGTGGCCCGTGTCGGCGTCAGCGTGGTCGGGACGCGCCTCACCGCTGAGTCCGACGGGGAGGGCCGGTATACCATTTCCGCCGTGCCGCCGGGGACCTACCACCTCCGGGCTCGGCTCCTGGGTTATGCCGCCGGAGACACGACGATCGTCGTGCAGGTCGGGCAACGGGTCAGCGCCGACTTCCGGCTCCAACCGAGCGCGATCGAGTTGAACCCGGTGGTGGCCGTGGGCTACGGCACGCAGCGGAAAGCGGACCTGACGGGCTCGGTCTCCTCGGTCACCGGGCCGGAAATCGCGACGAATCCGGTAGACCGGGCCGACCAAGCCCTCGCCGGTCGGGTGCCCGGGATGCAGGTGCAGACCACGAACGCACAGCCCGGCTCAGAGCTGCGCATCCGACTGCGCGGGGGGAATTCGCTGTCGGGGGACAACTCGCCGCTCGTCGTGATCGACGGCGTCATCGGCGCGGACTTGAGCCTGATCAATCCGAGTGACATCGAGACGTTCGACGTCCTGAAGGACGCCTCGGCCACGGCAATCTACGGCGCACGCGGGGCCAACGGCGTCATCCTCGTGACGACCAAGCGGGGTCAGGGACCGTTCCACTTCGACTACTCCACGTACATCGGCGCGCAGGACGTGAGCAAGCACATCGCCGTCCTCAACGCCGATCAGTTCGCGCTGCTGTACATGCGCAACCCGAACCACGACAAGAGCGTCAAGCTGGACACGCTGACCCACCTATCGACCACGGACTGGCAGGACGTGGTCTATCGATCCGCCCCGATTCAAAACCACCAGATCCAAGTCAGCGGCTCGAGCGGCGCCAGCAGCCTGTTGCTCTCCGCCAACTGGTTCGACCAGCAGGGGGTGTTGCTCGGCTCCGACCTCACGCGCGGGTCGTTGCGCTTCAACCTCGACCAGGGCCTGGGCGCGCGATTTCGGCTGGGAACGCGTGTGACCTACACGCGTACGGTAGGGAGCCAGGCTCGGGTCAACAGCGGGTATGGCTCGGGTGGCGGACCCGTGACGATGCAGGCACTCCGCTTCGCGCCCACGATCCCGGTGCGCGATTCCACCGGCAACTTCAGCGGCCCGCTCCTGCCCAGCGCGAACGACAACCCGATGGCGATCATTGAGCTGCGCCAGGACAACACCACCACCGGGTACGGGATCGGGACCCTGTTCGGGGAATACGACCCGCTGCCGGGCCTCACCTTGCGAACCAGCCTGTCGTACACCTCCAGCGATGTCCTCGAGCAGCAGTACGTCTCCCGCAAGCTGCAGGCCTCCCTGAACCTGGGGCAGGCGAACATCGACGACAACACCGCTACCACGTGGTTGGTCGAGAACACGGCGACGTTGCATCGCGCGCTGGGGAGGCAGCACGACCTCACGCTGCTGGGCGGCTTCACGGCGCAACAGACGGACAACGGGGCGAACAGCGCGCAAGGTGTCGGCTTCACGAGCGACTTGCTGGGCTACCGGCGGTTGAACCTCGCGGACCAGGTGACCGGGAGCTCGAACGCGACGCGCCAACGGGTGCTCTCGTACCTCGGTCGCGTGAACTACAGCCTGGCGGGAAAGTACCTGGTGACGGGCACGGTCCGGGCCGACGGCTCCTCCAAGTTCGCGGCGAACAACAAGTGGGCGGTCTTCCCCTCTGCCGCGGTGGCGTGGCGCCTCAGCGACGAGCCGTTCCTGCGCCGGCTCATCCCCGCCGTGAGCGAGCTGAAGCTGCGCCTGAGCGCGGGTAGCACCGGGAGCAACGCCATCCCGACGTACCAGTCCCTGGCCGCGTGGAACGTGGGTGCGCCCTATGCGATCGGCCCGACGGCGTTCTTCAACGGCGCCACCCTCAGCCGCATCACCAACCCCAACCTGCGTTGGGAAACGACGGTTCAATACGACGCGGGCGTGGACCTCGGCCTGTTCGGCAACCAGCTGACCGTCACGGCCGACGCGTACGACAAGACGACCAAGGACCTGCTGTACGCGAAGCAGGTGCCGTACCTCCTGGGGTTCGCGAGCTACGTCACCAACATCGGGAGAGTGCGGAACCGCGGCCTGGAGCTCGCGGTCGACACACGTTCCGCCAGCCGTGGTCTCGAGGTGCGCCTGGGCGGCAATGTGTCGCTCAATCGCAGCAAAGTGCTCGATCTGGGAGGAGACCGGCAGTTCTTCCTCACGGGGTCGAACACCTCACTCCCGAGGTGGGAGAACGACGTGATCGTGCAGGTGGGTCAGCCCCTCGGCAATTTTTACGGCTACGTGTGGGACGGAATCTTCCAGAGCTCGGCCGAGGCTGCCGCCAGCGGCCAGGCGGGCGCGGTCGTCGGAGGCGACAAGTTGAGAGACGTGAACGGCGACCGAAAGATCGACAGCAACGACCAAACCATCCTCGGCAATGCACAGCCGCGCTATCTGTTCGGCCTTACCGGCTCCGTAACCTACGATCGATTCTCGCTCAGCGTCCTGGTGCGCGGGGCCCTCGACTTCCAGGTGGTCAACGTGAGCCGCGCGGGGATGGAAACGCCCGGTGGCTCGAGCAACATGCTCACGTCGGTGCTGGGCTACTGGACGACGACCAACCCGAGTAACTCGATGACGGCGCTCAACGTCTCGCCGTTCGACGGATTGACCTCGCGCTGGGTCGAGGACGGCTCGTTCGTCCGCCTCCAGAACGTCACCGTGCAATGGGACGTGCCGGAGCGGCTCGGCGCGCGCGTGGGGGTGCGGCGGCTCCGCCTCTACCTGAGCGGGCAAAACCTCCTCACCGCCAGCCGCTACTCGTGGTACGACCCCGAGGTGAGCTCACGCGGGACGAGCGACCTCACGCTCGGTTGGGACGACTCCAACTATCCCGGCACGAAGACCGTCACCGTCGGCGCCAGCGTCGGCTTCTAG
PROTEIN sequence
Length: 1011
MRTIRVCLIGCAALLAAAGGATAQDSSGAIAGVVRARDTGTPVARVGVSVVGTRLTAESDGEGRYTISAVPPGTYHLRARLLGYAAGDTTIVVQVGQRVSADFRLQPSAIELNPVVAVGYGTQRKADLTGSVSSVTGPEIATNPVDRADQALAGRVPGMQVQTTNAQPGSELRIRLRGGNSLSGDNSPLVVIDGVIGADLSLINPSDIETFDVLKDASATAIYGARGANGVILVTTKRGQGPFHFDYSTYIGAQDVSKHIAVLNADQFALLYMRNPNHDKSVKLDTLTHLSTTDWQDVVYRSAPIQNHQIQVSGSSGASSLLLSANWFDQQGVLLGSDLTRGSLRFNLDQGLGARFRLGTRVTYTRTVGSQARVNSGYGSGGGPVTMQALRFAPTIPVRDSTGNFSGPLLPSANDNPMAIIELRQDNTTTGYGIGTLFGEYDPLPGLTLRTSLSYTSSDVLEQQYVSRKLQASLNLGQANIDDNTATTWLVENTATLHRALGRQHDLTLLGGFTAQQTDNGANSAQGVGFTSDLLGYRRLNLADQVTGSSNATRQRVLSYLGRVNYSLAGKYLVTGTVRADGSSKFAANNKWAVFPSAAVAWRLSDEPFLRRLIPAVSELKLRLSAGSTGSNAIPTYQSLAAWNVGAPYAIGPTAFFNGATLSRITNPNLRWETTVQYDAGVDLGLFGNQLTVTADAYDKTTKDLLYAKQVPYLLGFASYVTNIGRVRNRGLELAVDTRSASRGLEVRLGGNVSLNRSKVLDLGGDRQFFLTGSNTSLPRWENDVIVQVGQPLGNFYGYVWDGIFQSSAEAAASGQAGAVVGGDKLRDVNGDRKIDSNDQTILGNAQPRYLFGLTGSVTYDRFSLSVLVRGALDFQVVNVSRAGMETPGGSSNMLTSVLGYWTTTNPSNSMTALNVSPFDGLTSRWVEDGSFVRLQNVTVQWDVPERLGARVGVRRLRLYLSGQNLLTASRYSWYDPEVSSRGTSDLTLGWDDSNYPGTKTVTVGASVGF*