ggKbase home page

13_2_20cm_scaffold_2283_10

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 9295..10809

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 523.0
  • Bit_score: 541
  • Evalue 1.00e-150
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 523.0
  • Bit_score: 541
  • Evalue 1.40e-150
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 498.0
  • Bit_score: 289
  • Evalue 2.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1515
ATGACCGTGGGGCCTCGTCTCCTGGCCGCTCCAGCCGCGTTGCTCGTCGGCCTCGCGGGCTGCAAGAAGGCGGAGTCCGCGCCGCTGTACGAGAAGATCGCCGTGGCGCCCCGCGACATCGTCGTCACGGCGTCGGCCGAAGGCGTGATTCAGCCCACCCTCAAGTTCAGCGTGAAATCCAAGGCGTGGGGCCAGATCCTCGCCATGCCCGTCCAGACGGGCGACGAGGTCCAGAAGGGGCAGCTCTTGACGAAGGTCGATCCGCGCATTCCGCAGAACAATCTGGCCCAGGCGCAGGCGGCCCTCGATAAGGCCCAGGCGCAGCTCGCGAACGCCACGACCCAGCTCAAGCGCAGCGAGACGCTCTTCAACAGCCAGTCGATCGCGGAGACCGACTACGACGCGGCCAAGCTGGCCTACGCCACGGCGCATTCGGCCGTCGTGACGGCCGAAGCGAATTTGCAAACCGCCAAGGACGCGATGGAGGACACGCAGGTCCGCGCGCCCATCACCGGCACCATCCTGGAGCTCGACGCCGTGCTCGGCACGATCATCTCGAGCCCCACCCTGGGCGGCGGCACCGTCATCCTCAAGATGGCGAACCTCGACGTGGTGCAGGACTCGGCGATGGTGCTCGAGACCGACGTCGGCAAGGTGCAGCCCGGGATGGCGGCGACGATCACCGTCGACGCCTATCCCAACCGCCGGTTCGAGGGACGGGTTCTGAAGATCGAGCCGCAGGCGCAGATCGTTCAGAACGTGACGATGTTCCCGGTGCTGATCAACATCGAGAATCCGGGCCATCTCCTCAAGCCGGGCATGAACACGGAGGTGCGGATCCATATCGGGCAGCGCCAGGGCGTGCTCGCAGTGCCGAACGCCGCGCTCCGGACCCAGCGCGACGTCGCCGCGGGCGCGAGCGTGCTCGGCCTCGACCCCCAGGCCGTGCAGCAGCAGCTCGCCGCGGCGCAGCTGCCCGACGGGGCGTCACGGCCCGGCGGGGACAGCGCGACTGCCGCACGCCGCGGGAGGCCCCACCCCGCCGACAGCACGAAGGCCGGTGCCACGTTCACGACGCCGAATGGGCGGACGATCGCGCTGCCGCCGGGAGTGACGGCCGAGCAGGTGCAAGCGGCATTCGCGCGGATGCGGAGCGGCGCGGAGCCGACGCCGGCCGACCGGGCGCTGCTCGCCCAGGTGTTCGGCCGGGCGCAGCGGCCGGGGGGCGGGGGGGGGGGCGCGACGGGCCGGCAGACGCGCAACGGGGCCAGCGGGTACATCGTATTCGCGCTGCGGGGCGGGACGGTCCTGCCCGTCTCGATCCGCACCGGCCTCACCGATCAGGACTACATCGAGGTGACGAGCGGGCTGACTGACAAGGACACGGTGCTCGTGCTGCCGAGCGCGTCGCTCGTGCAATCGCAACAGCAGTTCCGTCAGCGCTTCCAGAACGTGACCGGCGGCGGGCTCCCCGGGTTACGGCAACAGCAGTCACAGGGCACGACGTCGAGATGA
PROTEIN sequence
Length: 505
MTVGPRLLAAPAALLVGLAGCKKAESAPLYEKIAVAPRDIVVTASAEGVIQPTLKFSVKSKAWGQILAMPVQTGDEVQKGQLLTKVDPRIPQNNLAQAQAALDKAQAQLANATTQLKRSETLFNSQSIAETDYDAAKLAYATAHSAVVTAEANLQTAKDAMEDTQVRAPITGTILELDAVLGTIISSPTLGGGTVILKMANLDVVQDSAMVLETDVGKVQPGMAATITVDAYPNRRFEGRVLKIEPQAQIVQNVTMFPVLINIENPGHLLKPGMNTEVRIHIGQRQGVLAVPNAALRTQRDVAAGASVLGLDPQAVQQQLAAAQLPDGASRPGGDSATAARRGRPHPADSTKAGATFTTPNGRTIALPPGVTAEQVQAAFARMRSGAEPTPADRALLAQVFGRAQRPGGGGGGATGRQTRNGASGYIVFALRGGTVLPVSIRTGLTDQDYIEVTSGLTDKDTVLVLPSASLVQSQQQFRQRFQNVTGGGLPGLRQQQSQGTTSR*