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13_2_20cm_scaffold_228_23

Organism: 13_2_20CM_Gammaproteobacteria_66_19

near complete RP 40 / 55 BSCG 42 / 51 ASCG 12 / 38 MC: 1
Location: comp(22770..23396)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily (Sigma-24) transcription regulator protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KR86_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 191.0
  • Bit_score: 222
  • Evalue 3.30e-55
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:EYC51660.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 201.0
  • Bit_score: 228
  • Evalue 6.40e-57
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 200.0
  • Bit_score: 198
  • Evalue 1.90e-48

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Taxonomy

Hylemonella gracilis → Hylemonella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGATGCTGCGCTCGCTCCTCGCTTGAGCCCCGGCGCCCAGGACCGCGAGATTGCCTCGACGGTGCGGCGCGAGCGCGGGCGCCTCCTCGCCTTCATTCGCGGGTCGATCGCCGATGCCGCCGAGGCGGAGGACGTGTTGCAGGAGGCGCTTTACGAGCTCGTGCTGGCCTACCGGCTGATGCAGCCGGTGGAGCAGGCGGGCGCGTGGCTCCGACGGGTGGCGCGCAATCGCATCATCGACCGGTTTCGTCGCAGGAGAGTCGAGCGACGCGCGCCGGGGGCGGCGGAGAGCGCCGCGGCGCCTCGGGCGGCGCAGGACGAGGGCTCCCTCGAGCCGGTGCTCGAGGATCTGCTTCCGGCCCCGGACAGCGGACCGGAGGCCGCGGTCATGCGCGAGCTGCTGCTCGCCGAGATCGAGGCGGCGCTTGCGGAGCTGCCGCCGGAGCAGCGCGAGGTATTCATAGCGCACGAGATCGAGGGCGTCAGCTTCAAGGAGCTGGCGGCGCGCACGGGAGTGGGTCTCAACACGCTGCTCTCGCGCAAGCGCTACGCGGTGCTCTATCTGCAGGAGCGGCTGCGAGCCGCCTGGGACGAGTGGCTGCCGGGCTCCCGGCTGAGTGAATGA
PROTEIN sequence
Length: 209
MDAALAPRLSPGAQDREIASTVRRERGRLLAFIRGSIADAAEAEDVLQEALYELVLAYRLMQPVEQAGAWLRRVARNRIIDRFRRRRVERRAPGAAESAAAPRAAQDEGSLEPVLEDLLPAPDSGPEAAVMRELLLAEIEAALAELPPEQREVFIAHEIEGVSFKELAARTGVGLNTLLSRKRYAVLYLQERLRAAWDEWLPGSRLSE*