ggKbase home page

13_2_20cm_scaffold_7_5

Organism: 13_2_20CM_Acidobacteria_58_27

near complete RP 48 / 55 BSCG 47 / 51 ASCG 14 / 38 MC: 1
Location: comp(3366..4190)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000367095E similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 193.0
  • Bit_score: 225
  • Evalue 6.70e-56
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 196.0
  • Bit_score: 229
  • Evalue 5.00e-57
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 187.0
  • Bit_score: 224
  • Evalue 4.20e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAGCGTAGCAGTGGACATTGAGTATCCAACAGAAGATAAGGTCGAAAGCGCCGGTCTCACTGGTCAGTCGCGGCAGTCGCACCAGAATCTCTTGGGCAGGAGAAGGTCAGTCCTTGGTCGCCAGCATTGCTCCGAGAAGTCAAAGCCCCACAGTTTCGATCAAGCATCTCTTAGCGAAACCATCCGGCAGGCGAAGCTGGGCGACTCCGCCGCCTTCGAGAAGATTTATCGACTCCATGCTGGGCGCGTGTACGCCCTTTGTCTTCGGATGGTGCGCGACTCGATCGAGGCCGAAGATTTAACCCAAGAAGCGTTTATGCAGGTATTTCGCAAGCTGAAGACGTTTCGCGGCGACTCAGCATTTTCTACGTGGTTGCACAGGCTGACGTTCAACATCGTGCTCATGCGCCTGCGCAAGAAGTCGCCACCGATCGTCTCGATCGACGCGACTGCAGACCAAGCCGATGAGGCCGACTCACCAGCCATCGATGTTGGTGTGCCCGACTTGCTACTGGAAGGCTCGATCGACAGAATGCGTCTCGAACATTGCATCAAGCAATTACCTGCGGGCTACCGCGCCATATTCGTCTTGCACGATATCCACGGCTACCAACACAACGAGATTGCCGAGATAGTAGGACGTTCTGTGGGGGATTCGAAGTCGCAGTTGCACAAAGCTCGCATGCGGCTTCGTGAACTGCTTCACGAAGTTCAACGAGAAAAGGCCCGGGACGACCGCTTGGCAGAACGGAAACTAGGCTGCGGGTCGCGCGGCCGCTTGGTCCCTTTGACGGCGGACGGAGTTGAAACTGAGCGAGGATAG
PROTEIN sequence
Length: 275
MSVAVDIEYPTEDKVESAGLTGQSRQSHQNLLGRRRSVLGRQHCSEKSKPHSFDQASLSETIRQAKLGDSAAFEKIYRLHAGRVYALCLRMVRDSIEAEDLTQEAFMQVFRKLKTFRGDSAFSTWLHRLTFNIVLMRLRKKSPPIVSIDATADQADEADSPAIDVGVPDLLLEGSIDRMRLEHCIKQLPAGYRAIFVLHDIHGYQHNEIAEIVGRSVGDSKSQLHKARMRLRELLHEVQREKARDDRLAERKLGCGSRGRLVPLTADGVETERG*