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13_2_20cm_scaffold_409_5

Organism: 13_2_20CM_Verrucomicrobia_55_10

partial RP 43 / 55 MC: 2 BSCG 40 / 51 MC: 1 ASCG 11 / 38
Location: comp(2454..3047)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAP9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 178.0
  • Bit_score: 252
  • Evalue 4.80e-64
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY16459.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428 similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 178.0
  • Bit_score: 252
  • Evalue 6.70e-64
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 180.0
  • Bit_score: 155
  • Evalue 1.70e-35

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGTGCTTCTGATATTGAGGCGGCAGCGGCGCGCTGGGTGGACGACCACGGTGAGTGCCTCTACCGATACGCTTTAGTGCGTGTGCACAAACCCGAAGTGGCCGAGGACCTGGTGCAGGAAACATTTCTCGCCGGTGTGCGCGGCTACGAAAAATTCGGGGCCCGTTCCTCGGAGCGAAGCTGGCTTGTTGGGATTTTGAAAAACAAAATCGTCGATCATTTTCGCAAGCTTGGCCGGGAGACTTCGTTTACGGACATGCAATTTCTTTCCAATGAGTATTCGGAAAAGTTTGTGTCTGTCGGTTTTTGGGACCACGAGAAAGGACCGCACGAGTGGAGACCGGGAGCGGACGAGGTGATACATCGCACCGAATTTTGGCAGGTGATGCGCGATTGCCTGACCAAACTTCCGCAAAAGGTGCGCGATGTTTTTACAATGCGTGAAATGGACGATGTGCCGAGCAAAGAGATTTGCGCGATCCTATCGATCACGGACAGCAATTTGTGGGTGATGCTGCATCGGGCGCGTATGGCGCTACGGGAATGTCTGGAAATGAACTGGTTCGACAAACCAGCAGGAGGAAGAGCGTAA
PROTEIN sequence
Length: 198
MSASDIEAAAARWVDDHGECLYRYALVRVHKPEVAEDLVQETFLAGVRGYEKFGARSSERSWLVGILKNKIVDHFRKLGRETSFTDMQFLSNEYSEKFVSVGFWDHEKGPHEWRPGADEVIHRTEFWQVMRDCLTKLPQKVRDVFTMREMDDVPSKEICAILSITDSNLWVMLHRARMALRECLEMNWFDKPAGGRA*