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13_2_20cm_2_scaffold_13794_15

Organism: 13_2_20CM_2_Actinobacteria_72_6

partial RP 7 / 55 BSCG 7 / 51 ASCG 7 / 38 MC: 1
Location: comp(10732..11451)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036CEBC1 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 239.0
  • Bit_score: 373
  • Evalue 1.70e-100
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 238.0
  • Bit_score: 371
  • Evalue 2.40e-100
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AFS12371.1}; TaxID=1232724 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 238.0
  • Bit_score: 371
  • Evalue 1.20e-99

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Taxonomy

Mycobacterium indicus pranii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCCCAATGTCGAACCGCCCGAGCCGACCCGTCTCGGCGAAGTGGTCTGGCTCGAACCATTTCCCGACGCCGTGATCGAGGGTGCCATCGACGCGCCACTCCGCCCGGAGGCCCGCTACGAGCAGGTGGAATCCGTCTCCCTGGCCTTCGTGACCGCCCTGCAGGCCCTGCCACCTCGCCAGCTGGCCGTCCTCATTCTGCGCGACGTCCTCGGATTCCACGCCACCGAGGTGGCGGACATGCTGGACTCGAGCGTCGAGTCGGTCAAGAGCGCCCTCAAGCGAGCGCGCGCCACCCTGCAACACCGACGGCCCGACGACCGCGAACCGCCGCCCGCCACCGACTCGCCCTCCGAGGACGCGATCGTGGCGAAGTTCGTCCGCGCCTGGGAGTCCGCCGATCTCGATGCCCTGGTGGCCCTTCTGACCGACGACGTCTTCATGTCGATGCCACCGATGCCCTTCGAATACGAGGGCCGGGACGTCGTGGCCCGCTTCTGCGCCAGCATCTTCCGGGCGGGGCGAAGGTTCGACCTGATCCCGACGCGAGCCAACGGCCAGCCGGCGTTCGGTGCCTACCTGCGCACCCCCACCGGCATCAGCCACGGGACCGGCCTCTACGTGCTCACCCTCACCGGCAACCGGATCTGCGCCATGACCCGCTTCGAAAACAGCGTCCTCCCGTCATTCGGGCTACCGCGATCGCTCCCGAGCCCGTAG
PROTEIN sequence
Length: 240
VPNVEPPEPTRLGEVVWLEPFPDAVIEGAIDAPLRPEARYEQVESVSLAFVTALQALPPRQLAVLILRDVLGFHATEVADMLDSSVESVKSALKRARATLQHRRPDDREPPPATDSPSEDAIVAKFVRAWESADLDALVALLTDDVFMSMPPMPFEYEGRDVVARFCASIFRAGRRFDLIPTRANGQPAFGAYLRTPTGISHGTGLYVLTLTGNRICAMTRFENSVLPSFGLPRSLPSP*