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2013_60cm_scaffold_57

Search features with annotation key words

Displaying items 31-60 of 144 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_60cm_scaffold_57_31
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35663..35986
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003742D5D
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEV82231.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (st
2013_60cm_scaffold_57_32
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35983..36507
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9W6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN99248.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
2013_60cm_scaffold_57_33
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

36521..36973
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54E24
protein of unknown function DUF1569
Uncharacterized protein {ECO:0000313|EMBL:AHG93546.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_57_34
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

37054..37452
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E98CD
Uncharacterized protein {ECO:0000313|EMBL:EEF57948.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
2013_60cm_scaffold_57_35
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37506..38789)
DNA (1284bp) protein (428aa)
Ankyrin n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D1Q4_PAESJ
ankyrin
Ankyrin {ECO:0000313|EMBL:ACT01918.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
2013_60cm_scaffold_57_36
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38832..39716)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003771C9F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG68441.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22)
2013_60cm_scaffold_57_37
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

39737..40642
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003817712
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88149.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_57_38
unknown

Not on your lists

comp(40751..40948)
DNA (198bp) protein (66aa)

This feature has no annotations

2013_60cm_scaffold_57_39
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(40949..41305)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Leptospira interrogans str. 2006001854 RepID=M6GFD5_LEPIR
Uncharacterized protein {ECO:0000313|EMBL:EMM81244.1}; TaxID=1001590 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. 2006001854.;"
hypothetical protein
2013_60cm_scaffold_57_40
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41776..42519
DNA (744bp) protein (248aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
2013_60cm_scaffold_57_41
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(42526..44478)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39097.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
2013_60cm_scaffold_57_42
unknown

Not on your lists

44584..45936
DNA (1353bp) protein (451aa)

This feature has no annotations

2013_60cm_scaffold_57_43
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(45950..48964)
DNA (3015bp) protein (1005aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
PAS domain S-box {ECO:0000313|EMBL:CDM65019.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multi-sensor hybrid histidine kinase
2013_60cm_scaffold_57_44
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

49395..49913
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBA0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93424.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_57_45
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

49916..50146
DNA (231bp) protein (77aa)
Transcriptional regulator, Cro/CI family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WF53_9SPHN
transcriptional regulator; K07727 putative transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
helix-turn-helix domain protein
2013_60cm_scaffold_57_46
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

50143..50862
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000382F21A
Protein of unknown function DUF4386
Uncharacterized protein {ECO:0000313|EMBL:AHG93422.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_57_47
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

50889..51740
DNA (852bp) protein (284aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG92307.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_57_48
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(51712..52224)
DNA (513bp) protein (171aa)
RES domain protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CH10_9LEPT
RES domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
RES domain-containing protein
2013_60cm_scaffold_57_49
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(52239..52673)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QAV3_RHOPT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
2013_60cm_scaffold_57_50
unknown

Not on your lists

comp(52880..53332)
DNA (453bp) protein (151aa)

This feature has no annotations

2013_60cm_scaffold_57_51
unknown

Not on your lists

comp(53372..53872)
DNA (501bp) protein (167aa)

This feature has no annotations

2013_60cm_scaffold_57_52
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(53988..54398)
DNA (411bp) protein (137aa)
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
2013_60cm_scaffold_57_53
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54441..55697)
DNA (1257bp) protein (419aa)
Beta-lactamase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUH4_9SPHI
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHF16224.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
2013_60cm_scaffold_57_54
unknown

Not on your lists

comp(56150..56551)
DNA (402bp) protein (134aa)

This feature has no annotations

2013_60cm_scaffold_57_55
unknown

Not on your lists

comp(56576..57394)
DNA (819bp) protein (273aa)

This feature has no annotations

2013_60cm_scaffold_57_56
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57771..58883)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034AD998
DNA methylase N-4/N-6 domain-containing protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
DNA methylase
2013_60cm_scaffold_57_57
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58891..60243)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034CA06D
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
hypothetical protein
2013_60cm_scaffold_57_58
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60233..62371)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP 102082 RepID=N8WEY8_9GAMM
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
hypothetical protein
2013_60cm_scaffold_57_59
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62623..65829)
DNA (3207bp) protein (1069aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036B0E55
Uncharacterized protein {ECO:0000313|EMBL:ENZ78292.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
hypothetical protein
2013_60cm_scaffold_57_60
unknown

Not on your lists

comp(66057..66575)
DNA (519bp) protein (173aa)

This feature has no annotations

Displaying items 31-60 of 144 in total

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