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berkeley_reactor_200306_planktonic_scaffold_162253

Search features with annotation key words

Displaying items 61-81 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_162253_61
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(74116..74814)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE96_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27148.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_162253_62
unknown

Not on your lists

75014..75286
DNA (273bp) protein (91aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_63
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

75283..76266
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00036219BD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ99615.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
berkeley_reactor_200306_planktonic_scaffold_162253_64
unknown

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76710..77219
DNA (510bp) protein (170aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_65
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77937..78581)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037FB6F9
bifunctional deaminase-reductase domain protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:CDM60997.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
berkeley_reactor_200306_planktonic_scaffold_162253_66
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(78799..79734)
DNA (936bp) protein (312aa)
UDP-glucose 4-epimerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFS5_SINAD
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AGA28112.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_162253_67
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(79877..83242)
DNA (3366bp) protein (1122aa)
UDP-glucose pyrophosphorylase n=2 Tax=Singulisphaera acidiphila RepID=L0DEQ6_SINAD
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:AGA27151.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
UDP-glucose pyrophosphorylase
berkeley_reactor_200306_planktonic_scaffold_162253_68
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(83261..84232)
DNA (972bp) protein (324aa)
UDP-glucose pyrophosphorylase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD28_SINAD
UDP-glucose pyrophosphorylase
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:AGA27152.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_162253_trna_1
unknown

Not on your lists

84463..84536
DNA (74bp)
transferRNA Asp
berkeley_reactor_200306_planktonic_scaffold_162253_69
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

85061..85294
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034B881B
Uncharacterized protein {ECO:0000313|EMBL:KIJ75728.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_162253_70
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85438..86484
DNA (1047bp) protein (349aa)
Orf33 n=1 Tax=Streptoalloteichus hindustanus RepID=A4KUA4_STRHI
Threonine dehydrogenase {ECO:0000313|EMBL:ETK37125.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alcohol dehydrogenase GroES domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_162253_71
unknown

Not on your lists

87098..87565
DNA (468bp) protein (156aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_72
unknown

Not on your lists

comp(87727..88134)
DNA (408bp) protein (136aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_73
unknown

Not on your lists

comp(88917..89378)
DNA (462bp) protein (154aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_74
unknown

Not on your lists

comp(89463..89744)
DNA (282bp) protein (94aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_75
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(90452..91222)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DAV2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25963.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_162253_76
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91749..93437
DNA (1689bp) protein (563aa)
ABC transporter domain protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RPI4_ALLVD
ABC transporter
ABC transporter domain protein {ECO:0000313|EMBL:ADC61566.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
berkeley_reactor_200306_planktonic_scaffold_162253_77
unknown

Not on your lists

comp(93759..94013)
DNA (255bp) protein (85aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_162253_78
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

94519..95226
DNA (708bp) protein (236aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DER0_SINAD
holliday junction resolvasome, DNA-binding subunit
berkeley_reactor_200306_planktonic_scaffold_162253_79
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

95274..96362
DNA (1089bp) protein (363aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD32_SINAD
Holliday junction DNA helicase subunit RuvB
berkeley_reactor_200306_planktonic_scaffold_162253_80
unknown

Not on your lists

comp(96288..96497)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 61-81 of 81 in total

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