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berkeley_reactor_200306_planktonic_scaffold_283737

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_283737_31
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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31317..32321
DNA (1005bp) protein (335aa)
Serine/threonine protein kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFN6_SINAD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA27670.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_283737_32
unknown

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32593..33231
DNA (639bp) protein (213aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_trna_1
unknown

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33195..33276
DNA (82bp)
transferRNA Leu
berkeley_reactor_200306_planktonic_scaffold_283737_33
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

33408..34730
DNA (1323bp) protein (441aa)
Site-specific recombinase XerD n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAA6_SINAD
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGA26309.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
berkeley_reactor_200306_planktonic_scaffold_283737_34
unknown

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35055..36968
DNA (1914bp) protein (638aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_35
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37166..40555
DNA (3390bp) protein (1130aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6S0Y8_9FIRM
berkeley_reactor_200306_planktonic_scaffold_283737_36
unknown

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40530..40949
DNA (420bp) protein (140aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_37
unknown

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41023..42690
DNA (1668bp) protein (556aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_38
unknown

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comp(42696..43436)
DNA (741bp) protein (247aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_39
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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43783..45384
DNA (1602bp) protein (534aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002892E80
Transposase {ECO:0000313|EMBL:AKH18927.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative transposase for insertion sequence element
berkeley_reactor_200306_planktonic_scaffold_283737_40
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45454..46227
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Paracoccus versutus RepID=F4ZZC0_PARVE
ATPase AAA {ECO:0000313|EMBL:KEP68764.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
istB; IS21 family transposase
berkeley_reactor_200306_planktonic_scaffold_283737_41
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

46867..47469
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RB05_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI16560.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
berkeley_reactor_200306_planktonic_scaffold_283737_42
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(47908..49080)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034AC06B
FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain protein {ECO:0000313|EMBL:EMI40886.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_283737_43
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(49080..51236)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJD0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84792.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_283737_44
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51374..52501)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAL5_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73944.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
berkeley_reactor_200306_planktonic_scaffold_283737_45
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(52552..53424)
DNA (873bp) protein (291aa)
ThiJ/PfpI domain protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LT78_BURGS
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain protein {ECO:0000313|EMBL:AEA66024.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
berkeley_reactor_200306_planktonic_scaffold_283737_46
unknown

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comp(53563..53685)
DNA (123bp) protein (41aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_47
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53821..54384)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=blood disease bacterium R229 RepID=G2ZV36_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA82932.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_283737_48
Glycine max, Glycine, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(54502..56223)
DNA (1722bp) protein (574aa)
PREDICTED: polyphenol oxidase A1, chloroplastic-like n=1 Tax=Glycine max RepID=UPI00023381C2
Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G31301.1}; TaxID=3847 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja.;" source="Glycine max (Soybean) (Glycine hispida).;"
tyrosinase
berkeley_reactor_200306_planktonic_scaffold_283737_49
unknown

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comp(56904..57344)
DNA (441bp) protein (147aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_283737_50
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(57459..59558)
DNA (2100bp) protein (700aa)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744FE6
Multicopper oxidase type 3 {ECO:0000313|EMBL:ELS33668.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
multicopper oxidase
berkeley_reactor_200306_planktonic_scaffold_283737_51
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

60304..60642
DNA (339bp) protein (113aa)
Tax=RBG_13_Planctomycetes_63_9_curated
berkeley_reactor_200306_planktonic_scaffold_283737_52
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

60715..61440
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI00037E8336
Tax=RBG_13_Planctomycetes_63_9_curated
berkeley_reactor_200306_planktonic_scaffold_283737_53
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62521..63261
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ26_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGJ18555.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
Displaying items 31-54 of 54 in total

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