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berkeley_reactor_200306_planktonic_scaffold_10709_37

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(40749..41351)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 197.0
  • Bit_score: 227
  • Evalue 1.00e-56
2''-5'' RNA ligase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMN3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 197.0
  • Bit_score: 227
  • Evalue 7.50e-57
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 197.0
  • Bit_score: 227
  • Evalue 2.10e-57

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAAACCACTCGTACGTTCGTGGCGATCGGCGTCTCGGAAGCCCTCGGGATCAAGCTCCGGCGTTTGCAGTCGCTGCTCGCCCCCGACATCCCGAACGTCCGCTGGTCCGAGGTCTTGCCGTTCCACGTCACTCTCGCCTTCCTCGGCGACGTCCACAACACCGACCTCAACCGGGTCTGCCAGGCCGTCGAAGACGCCTGCGCACCATTCACCCGGCTGGAGCTCCTCCTCGGCGGCCTGGGCGTGTTTCCCAACCCCCAACGCCCCCGGACCCTCTGGGTCGGCCTATCGGGCGACGAAATCGAAGGCCTCGCCGACCTCCGGGCTGCCGTCGTCGCGGCGGTCGCGGACGCGGGCTATCCCGCGGATGAAACGCAGTTCCAGCCCCACGTCACCCTCGGCCGGGTCAAAGTCAAGCGAGGCGAGTCGGCCGACTTCGACCTGACACCGCTCCTCAACCACTACCGGAACTGGGCGGCCGGGCTGATCCCTATCGGCGAGGTCGTCACCTACGCCTCGACCCTGACCAGGGAAGGCCCCATCTACGCGCCTCTCGCCAAGGCCCGGCTCCGATCCCGAAAATCCCGACCTAAGCCTTGA
PROTEIN sequence
Length: 201
MQTTRTFVAIGVSEALGIKLRRLQSLLAPDIPNVRWSEVLPFHVTLAFLGDVHNTDLNRVCQAVEDACAPFTRLELLLGGLGVFPNPQRPRTLWVGLSGDEIEGLADLRAAVVAAVADAGYPADETQFQPHVTLGRVKVKRGESADFDLTPLLNHYRNWAAGLIPIGEVVTYASTLTREGPIYAPLAKARLRSRKSRPKP*