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berkeley_reactor_200306_planktonic_scaffold_22519_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(11052..12170)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A1CA3 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 373.0
  • Bit_score: 461
  • Evalue 5.70e-127
Regulatory protein GntR HTH {ECO:0000313|EMBL:EDY22146.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 374.0
  • Bit_score: 429
  • Evalue 2.60e-117
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 368.0
  • Bit_score: 344
  • Evalue 2.90e-92

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCCCGCCGAGCCGAAACATCGCCGGATTTCCCGAGAGCTCCTGGCGGAGATCGCCGCGGGGAAGTACGGCCCGTCGGGCCGCCTCCCGAGCGAGGCGCAGCTCGTGGCCCGCTTCGGCGTCACGCGCCCGACGGTCGGGCGCGCGTTGCGAGACCTGCAGGACCAGGGCCTCATCGATCGCCGGGTGGGCTCGGGGAGCTTCGTCCGCAACGCCTCGGCCCCGGAGGTCACCACGCGCCAGCTCGGGCTCCTGATCCCCGGGCTCGGGACGACGGAGGTCTTCGAGGCGATCTGCGGCGAGTTGGCAGGTTTGGCGAGGGTGAGCGGCTATGGCCTCCTCTGGGGAGGCGCCGGCCCTCGACCGCAGGACGACATCAGCGTCGAGGACGCCGAGGGGCTCTGCGACCAGTTCATCAGCAGCCAGGTGGCGGGCGTCTTCTTCGCCCCGTTCGAACACACCGCCAGGCGGGAGGACGTCAACGTCCGCCTCGCCGAGCGGCTCCGCAAGGCGGGGATCTCGGTCGTCCTCCTCGACCGCGACCTCGGGGCCTTCCCCGCGCGGAGCGGCTTCGACCTCGTGGGGGTCGACAACTTCGCCGGCGGATACGCCCTGGCCCACCACCTGCTCAAGCTCGGCTGCCGGACCCTGGCCTTCGCCGTCCGCCCGCACTCGGCGCCCACCGTCTCCGCCCGGATCGCCGGCGCGAGGGAAGCGATCCTCGACCGAGGGCTCCCCGTCCCGCCCGGCTTCGTCCACATGGGCGAGCCGGACGACCCCGCGTTCGCCCAGGGATTCGCGGGCCGAGGCCGCGTCGACGCCATCCTCTGCGCCAACGACGACGTCGCCGCGCTCCTCTTGCGTGCCCTCGACAAGGCCAGTATCCGCGTCCCGGCCGACGTGAGGCTCGTCGGCTTCGACGACGTCCGCTACGCCAGGATGCTCTCGGTCCCCCTGACGACGATGCACCAGCCCTGCCGAGAGATCGCCGTCGTCGCCCTCCGGACGATGCTGGAGCGCATCGCCGACCCGGCCCTCCCACCCCGGAGCATCACCCTCTCGGCCGGCCTCGTGGTGCGGGAGTCTTGCGGGGCGTATTTGGGGCAGGCGAAGGGTTGA
PROTEIN sequence
Length: 373
MPAEPKHRRISRELLAEIAAGKYGPSGRLPSEAQLVARFGVTRPTVGRALRDLQDQGLIDRRVGSGSFVRNASAPEVTTRQLGLLIPGLGTTEVFEAICGELAGLARVSGYGLLWGGAGPRPQDDISVEDAEGLCDQFISSQVAGVFFAPFEHTARREDVNVRLAERLRKAGISVVLLDRDLGAFPARSGFDLVGVDNFAGGYALAHHLLKLGCRTLAFAVRPHSAPTVSARIAGAREAILDRGLPVPPGFVHMGEPDDPAFAQGFAGRGRVDAILCANDDVAALLLRALDKASIRVPADVRLVGFDDVRYARMLSVPLTTMHQPCREIAVVALRTMLERIADPALPPRSITLSAGLVVRESCGAYLGQAKG*