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berkeley_reactor_200306_planktonic_scaffold_26574_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(17813..19282)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2526 similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 488.0
  • Bit_score: 634
  • Evalue 8.50e-179
Probable outer membrane lipoprotein IbeB {ECO:0000313|EMBL:EDL59672.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 440.0
  • Bit_score: 595
  • Evalue 4.70e-167
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 433.0
  • Bit_score: 581
  • Evalue 1.40e-163

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAACCACTCAGCGAATCGCTCGCTCACAAAGCATAGGAAGCCGGCCCTGGCGTTCGTGGTCGCGTGCGGCTTCCTACCGATCCTGACGTCCTGCGGAATCCCCTCCCTCCGTCCGCCGGACCCGGGACCTGCCGTGCCGACGAGCTTCAAAGGGGTGACGACTCCGGACAACTCGGCCCAGATCGGGATCGAGGAGTTCTTCAACGATTCGACCTTGATCGGCCTGATCGAGCAGGCGCTCGTCGGCAACCAGGAGCTGAAGATCCTGGCCGAAGAGATCCAGATCGCCAGCAACACCGTCCTGGCGAGGAGGGGTGCGTATTTGCCCTTCCTCAGCCTCGGGGCGGGGGCGTCCGCGGACAAGCCCAGCCGCTACACGCGTGACGGGGCCATCGACAACCAGCTCAACATCCTCCCCGGCCAGATGTTCCCCGATCCTTTGCCGAACTTCCTGCTGGCGGCCAACATCTCATGGCAGGTCGACATCTGGCGCCAGTTGCGGAACGCCAGGGACGCGGCGTCGCTCCGTTATCTCGGCACGATCGACGGGCGTACTTATATGGTGACCCGGCTGGTCGCCGAGATAGCCGAGAACTATTACGGCCTCATGGCCCTCGACAAGCGGATCGAAAACCTGGATCGGACGATCGAGCTCCAGGAGCAGAGCCTCAGATTCGCCCTCGCGAACAAGGCCCAGGCCCGCGGCACCGAGCTGGCCGTCCAGCGATTCACGGCCGAGGTTCGCAGGAACCAGAGCGAAAAGCTGATCATCCGTCAGGAGATCATCGAGGTTGAAAACCGGATCAACTTCCTTTCCGGGCGCTTCCCGATGCCGGTCGAGCGGATGTCGGAGCAGTTCTTCGACCTGGAGCTTCGCAGGCTCAGCCTGGGCGTCCCCTCGCAGCTCCTGCAATTCCGCCCCGACATCCGTCAGGCGGAGCGCGAGGTCGAGGCCTCCGGCCTCGACATCAAGGTGGCCCGGGCCCGATTCTTCCCGCAGTTCGTCATCACCGGCGGCGTCGGCTACGCGGCGTTCAACCCCAGGTATCTGCTCATCACCCCGGAAGCCTTGCTCGCCAACGTCGCCGGCGACCTCGTCGCCCCGTTGATCAACCGAAAAGCGATCAAGGCCGACTACCTGACCGCGAATTCCCGGCAGTTGCAGGCCATCTACAACTATCAGCGTATCATCATCAACGCCTTCACCGAGGTGATCAACCGCGTGTCCATGGTGCAGAACTACCGCCAGAGCATCGAGATCAAGAAGCTGCAGCTGAAAGCCCTCGAAGAATCGGTCAACGTCGCCACCAAGCTCTTCCAGAACGCCCGCGCCGAATACATCGACGTGCTCTTCGCCCAGCGTGACCTGATGGATGCGAGGATGGTCCTGATCGATACCAAACGTCGGCAACTGTCTGCCGTTGTCAACACCTATCAAGCACTCGGCGGTGGCGTGTTCGTCCGCTGA
PROTEIN sequence
Length: 490
MNHSANRSLTKHRKPALAFVVACGFLPILTSCGIPSLRPPDPGPAVPTSFKGVTTPDNSAQIGIEEFFNDSTLIGLIEQALVGNQELKILAEEIQIASNTVLARRGAYLPFLSLGAGASADKPSRYTRDGAIDNQLNILPGQMFPDPLPNFLLAANISWQVDIWRQLRNARDAASLRYLGTIDGRTYMVTRLVAEIAENYYGLMALDKRIENLDRTIELQEQSLRFALANKAQARGTELAVQRFTAEVRRNQSEKLIIRQEIIEVENRINFLSGRFPMPVERMSEQFFDLELRRLSLGVPSQLLQFRPDIRQAEREVEASGLDIKVARARFFPQFVITGGVGYAAFNPRYLLITPEALLANVAGDLVAPLINRKAIKADYLTANSRQLQAIYNYQRIIINAFTEVINRVSMVQNYRQSIEIKKLQLKALEESVNVATKLFQNARAEYIDVLFAQRDLMDARMVLIDTKRRQLSAVVNTYQALGGGVFVR*