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berkeley_reactor_200306_planktonic_scaffold_26574_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 68270..68845

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D633_PAESJ similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 189.0
  • Bit_score: 139
  • Evalue 2.00e-30
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 168.0
  • Bit_score: 141
  • Evalue 1.50e-31
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 188.0
  • Bit_score: 152
  • Evalue 3.10e-34

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCGATCGAGACACACGGACCCTGATTATTGATCTGGCCGAGAGGCTGGTGCGGACCCGGGGATACAACGGCTTCAGTTACCGCGACCTGGCCGAGCAAATCGGGATCAAGACGGCGAGCATCCACTATCATTTCCCGACCAAGGGAGATCTGGGAGTCGCCATGGTCGACAACGAGAGGGAGCTTTTCGCCAGGACCCTCGCCCGACTCGACGCCGAGGAGAAGGACCCGCGGCGACGGCTGGAGCGCTTCATCCAGGTCTTCCAGGCCACCACAATCGGTTGTGACAACCGGATGTGCCTGGGTGCCATGCTCGCGGTCGAGCAGGAGACCTTGCCGGATCCCGTCCGGCAAGCCGTCCGGTGCCTCTTCGAGCACAACGAGGCGTGGATTGCGAAGGTATTGGAGGAGGGGCGCCGGCTGCGGCAATTCGGGTTCAAAGAGCCCGCTGTCGTGGCCGCCCGGACCGTATTCTCGGCGATCGAAGGGGGGTTGTTGATGGCCAGAGCCTTCCGCGACATCGGCCGGTTCGAAGCCTCGACCCGATGGATTATCGAGAGCCTGATCGCCTGA
PROTEIN sequence
Length: 192
MSDRDTRTLIIDLAERLVRTRGYNGFSYRDLAEQIGIKTASIHYHFPTKGDLGVAMVDNERELFARTLARLDAEEKDPRRRLERFIQVFQATTIGCDNRMCLGAMLAVEQETLPDPVRQAVRCLFEHNEAWIAKVLEEGRRLRQFGFKEPAVVAARTVFSAIEGGLLMARAFRDIGRFEASTRWIIESLIA*