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berkeley_reactor_200306_planktonic_scaffold_26574_96

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(138867..139238)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PP07_MEIRD similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 116.0
  • Bit_score: 70
  • Evalue 7.20e-10
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 116.0
  • Bit_score: 70
  • Evalue 2.00e-10
Strain A contig00041, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54467.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 116.0
  • Bit_score: 70
  • Evalue 1.00e-09

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Taxonomy

Meiothermus ruber → Meiothermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCCGTGGTGCTCGTGGCGGATGCCGACCCGGAACTGGCACACCTGATCGGGCTTTTTCTGGCCGAAGGGGGATATGCCGTCGAGACCGCGTCGGCGGTGTCGGAGTGCGTGGAACGGTTGCGCCGGCGCCCCCCGGACGTGCTCGTGCTCGACGGAGAGTTGCCGACGGGTACGGGAGGCGGCGTCCTCGCCCGCCTCCGCGACGCCGCGCCCGCGGCACTGCCGTTCATCGTGCTCATGACGGGCGACCCCGTCGACAGGCGCGAGCTGGCGGCCCTGTCCGTCGTCTCGTGTCTGCAGAAGCCTTTCCGACTGGCCGCGCTTCTGGAAAGCATAGACGCCTTTCCCGGCCTTCTCCCGATCGTTTGA
PROTEIN sequence
Length: 124
MPVVLVADADPELAHLIGLFLAEGGYAVETASAVSECVERLRRRPPDVLVLDGELPTGTGGGVLARLRDAAPAALPFIVLMTGDPVDRRELAALSVVSCLQKPFRLAALLESIDAFPGLLPIV*