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berkeley_reactor_200306_planktonic_scaffold_39194_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(18776..19483)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 221.0
  • Bit_score: 322
  • Evalue 2.80e-85
Pseudouridine synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9M3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 221.0
  • Bit_score: 322
  • Evalue 2.00e-85
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 221.0
  • Bit_score: 322
  • Evalue 5.70e-86

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGTCCACGCTCGAGCTCCTCTACGAGGACAATCACTGCCTCGCCGTCAACAAGCCGGCAGGACTGCTGACCCAGGGGGACGCCTCGGGCGAGCCGAGCCTGGTCGACCTCGCGCGGGACGACCTGAAGGTCCGGTTTCAGAAGCCGGGGAACGTCTACGTCGGCCTCGTCCATCGGCTCGATCGCACGACCTCCGGCGTCGTGCTGCTGGCCCGGACGAGCAAGGCCGCGGGCCGGCTCTCCGCCCAGTTCCGGGACGGGACGGTCGAGAAGATCTACTGGGCGATCGTCGAGGGGAGCGTGGCCCCCGACTCGGGGGAGTGGTCCGACACCCTGTCGAAAGACGAGGCGAGGAACGTGGTCCGGACGGTGCCAAGGGGCACGCCGGGGGGGCTCGAGTCCCGGCTTGCGTATCGGGTGCTCGGGCGAAAGGCGGGGACGACCTGGGTGGAGGTCCGGCCGATCACCGGCCGGAGTCATCAGATCCGCGTCCAGTTCGCCGAGCGTGGGTTCCCGATCGCGGGCGACCGGAAGTATGGGGCGAAGTCCACGGTCCGGGCGGGCGACGGGTTGGTGCGCGTCGCGCTGCACGCCCGACGACTCACGTTCAGTCATCCGACCCGGGGGGAAGCGATTTCGGTCCTGGCTCCGGTGCCGGGAGACTGGCCCTCGACAGCGTTCGGAGCGACGGGAGCGCCGAGCGACTGA
PROTEIN sequence
Length: 236
MSTLELLYEDNHCLAVNKPAGLLTQGDASGEPSLVDLARDDLKVRFQKPGNVYVGLVHRLDRTTSGVVLLARTSKAAGRLSAQFRDGTVEKIYWAIVEGSVAPDSGEWSDTLSKDEARNVVRTVPRGTPGGLESRLAYRVLGRKAGTTWVEVRPITGRSHQIRVQFAERGFPIAGDRKYGAKSTVRAGDGLVRVALHARRLTFSHPTRGEAISVLAPVPGDWPSTAFGATGAPSD*