ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_35019_47

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(78112..78975)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 285.0
  • Bit_score: 450
  • Evalue 1.40e-123
Formamidopyrimidine-DNA glycosylase Fpg n=2 Tax=Singulisphaera acidiphila RepID=L0DBD2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 285.0
  • Bit_score: 450
  • Evalue 1.00e-123
formamidopyrimidine-DNA glycosylase Fpg similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 285.0
  • Bit_score: 450
  • Evalue 2.90e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGCCCGAGCTTCCTGAAGTCGAGACGATGGTCCGTGGGCTGCGTCCGGCCCTCGAAGGGCGAACCTTGCGCGAGTTGAAGGTCATCGACCCGTTCCTGTTACAAGGCTGCACGGCCGACGAGATCGAGACCCGCAGCCGGGGCGCGGACGTCGCGCGGATCGAGCGGCGGGGTAAGTGGGTCGTCATCCTGTTCGGGGGAGACCGAGGATTGATCGTCATCCAGCCCCGGATGACTGGAGGGTTTTGGCTCATCCCTCCCGAACGCCCGGACCACGTGCGCATGACGCTCCACCCGGACGGATCGCGGGAGACGGTCTGGTTTTGCGACAACCGTCGCTTGGGGAAGATCGCCTGGTTCGCGACTCCCGAACTGGCCCGGGACGCCTTCGCCCGTTCCCACGGCCCCGATGCGCTCGAGATCGCCCAGGCCGACCTCGCCACGCGCCTGACAAGGACTGCGCGGGGGATCAAGCCGACCCTGATGGACCAGAAGGTCCTCGCCGGGATCGGGAACATCTACGCCGACGAGGTCCTCTTCCGCTCTCGGATCCACCCGACCCGGCCGGCCGACTCGTTGAGGACGGATGAGGTCGGTCGCTTGCACGCGGCGATCGGCGAGGTCCTTGCCGAAGCGATCGCCGCCGAGGGCTCGAGCTTCGACGCCGGCTACCGAACCGTCCTGGGCCTCGAGGGGGGCTTCCTCGCCAAGAACGCCATGTACGGACGAGGAGGGCAACCCTGCCCCTCCTGCGGCTCCCCGATCGAGAAGACCCGGATCGCGGGCCTCGTCGGCCGCCCGACCCACTTCTGTCCTTCGTGTCAGCCGGTCAAACCCCCGCGTGGGGGCCGGAAGAGCCCCTAG
PROTEIN sequence
Length: 288
MPELPEVETMVRGLRPALEGRTLRELKVIDPFLLQGCTADEIETRSRGADVARIERRGKWVVILFGGDRGLIVIQPRMTGGFWLIPPERPDHVRMTLHPDGSRETVWFCDNRRLGKIAWFATPELARDAFARSHGPDALEIAQADLATRLTRTARGIKPTLMDQKVLAGIGNIYADEVLFRSRIHPTRPADSLRTDEVGRLHAAIGEVLAEAIAAEGSSFDAGYRTVLGLEGGFLAKNAMYGRGGQPCPSCGSPIEKTRIAGLVGRPTHFCPSCQPVKPPRGGRKSP*