ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_35019_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 83086..83403

Top 3 Functional Annotations

Value Algorithm Source
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBU8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 105.0
  • Bit_score: 188
  • Evalue 3.40e-45
carbon dioxide concentrating mechanism/carboxysome shell protein similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 105.0
  • Bit_score: 188
  • Evalue 9.80e-46
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:AGA26141.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 105.0
  • Bit_score: 188
  • Evalue 4.80e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 318
ATGTTCGTCGCCCGAGTGACCGGCAGTGTGGTGGCCACCCAGAAGGTGGCGTCGATGACCGGGCACAAGCTCCTGACCGTCGAGCCCTACCGGGTCGACGAGAAGGCGAAGGACCGACTGGTCCCGACGGGGAGGACCTTCGTGGTGGTCGACACGCTGGGGGCCGGGCTCGACGAGATGGTCCTCATCTGCCAGGGGTCGAGCGCCCGGCTCACCCCCGAGACCGAGAAGCTGCCGATCGACGCGGTCGTCATCGGCCTGGTCGACACGGTCGACGTCGGCGGCCAAACGATCTTTTCGAGTCGCGAGCCGTCCTGA
PROTEIN sequence
Length: 106
MFVARVTGSVVATQKVASMTGHKLLTVEPYRVDEKAKDRLVPTGRTFVVVDTLGAGLDEMVLICQGSSARLTPETEKLPIDAVVIGLVDTVDVGGQTIFSSREPS*