ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_41758_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(12678..13775)

Top 3 Functional Annotations

Value Algorithm Source
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 360.0
  • Bit_score: 570
  • Evalue 1.60e-159
Methylthioribose-1-phosphate isomerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKS4_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 360.0
  • Bit_score: 570
  • Evalue 1.10e-159
S-methyl-5-thioribose-1-phosphate isomerase similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 360.0
  • Bit_score: 570
  • Evalue 3.20e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1098
GTGAGCTCCGGCTCCGCTGACCAGGCCGTCGACACGGTCGGCTGGGTGGGGAACGCGTCCGACGGATACGTCCGCCTGATCGACCAAACCCGCCTGCCGACCGAGTTCCTCGAGATCGACTGCCGAGACGTCCCCACCGTCTGGGAAGCCATCCGCTCGCTCCGCGTCCGAGGCGCCCCGGCGATTGGCATCGCCGCCGCCTACGGCGCGGTGCTCGGCGGGCAAGTCGCGCGGGGCGGGGACATCGAGTCGCTTCACAGGGCCCTCCGCGATGCGACGACGATGCTCCGCACCAGTCGTCCGACGGCCGTGAACCTCTTCTGGGCCCTGGATCGCATCGATCGGACGATCGAGTCCGAGCCCTCCCTCGGGCCCGAGGCGCTCCTCTCGCGACTGCTGGAGGAGGCGCACGCGATCGCCGACGAAGACCGGGCGATGTGCCGGTCCATCGGCCGCTTCGGCGCCGAGCTGCTCTCGAAGGGGCAGGGGGTCCTCACGCATTGCAATGCGGGAGGATTGGCCACCGCCGATTACGGCACGGCCCTGGCCGTCATCTTCACGGCCCATGAGCAGGGCAAGGCGGTCCACGTCGTCGCCGACGAGACCCGGCCGCTCCTCCAGGGGGCGAGGCTCACGGCCTGGGAGCTGCAACGCCGGGGCATCCCCGTGACCGTCATCTGCGACAACATGGCGGCGCAGGTGATGAAAGAGGGCAAGGTCCAGGTCGTCATCGTGGGCGCCGACCGGATCGCGTCCAACGGGGACACGGCGAACAAGATCGGCACCTACGGCGTCGCCCTCCTCGCGAAGGCGCACGGGCTTCCCTTCTACGTGGCCGCGCCGTCGAGCACGTTCGACCTGACCCTCGCGGATGGCTCGGGGATCCCGATCGAGCAGCGGGATCCGAGCGAGATCACCGAGGGGATGGGACGCCGCACGGCCCCCGAAGGGGTGGCCGTCTACAACCCGGCCTTCGACGTCACCCCGGCCGAGCTGATCACCGGCATCATCACCGAGCGAGGCGTCGTCCAGCCCGTCGACTCGCGGACGATCCTCGAAGTCCTTGGCGGCCCGAATGAACCGGCTTTGACCCGATGA
PROTEIN sequence
Length: 366
VSSGSADQAVDTVGWVGNASDGYVRLIDQTRLPTEFLEIDCRDVPTVWEAIRSLRVRGAPAIGIAAAYGAVLGGQVARGGDIESLHRALRDATTMLRTSRPTAVNLFWALDRIDRTIESEPSLGPEALLSRLLEEAHAIADEDRAMCRSIGRFGAELLSKGQGVLTHCNAGGLATADYGTALAVIFTAHEQGKAVHVVADETRPLLQGARLTAWELQRRGIPVTVICDNMAAQVMKEGKVQVVIVGADRIASNGDTANKIGTYGVALLAKAHGLPFYVAAPSSTFDLTLADGSGIPIEQRDPSEITEGMGRRTAPEGVAVYNPAFDVTPAELITGIITERGVVQPVDSRTILEVLGGPNEPALTR*