ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_58078_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(36718..39903)

Top 3 Functional Annotations

Value Algorithm Source
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIU2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 1067.0
  • Bit_score: 1320
  • Evalue 0.0
DNA/RNA helicase similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 1067.0
  • Bit_score: 1320
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 1080.0
  • Bit_score: 1336
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_PLX_64_10 → Bacteria

Sequences

DNA sequence
Length: 3186
ATGATCATCTTGCATGGGGCCTTCTTCGAAGGCCGGCTCGTCCTCTGGGGTGAGGCGTCGAAAGAGCCCTCGGGGCGTCGGCCGAAGAGTGCCCGGGCGAAGGGGCACGCGGCCGAGGCGCACCCGTTCGACGCGGGGGCGTCGGCGATGTCTGATGCGTTGTCGGGGGCCCTGCCCGAGTTCTCGGCCCACCCCGGCGAATTCGAGGGGAGGGTGATCTGGCTCCCCTCGACCGATTCCGGGCCGGTGGCCTCGAGCCCCCTCATCGCCGAGCCGCCGGGGTCGGGGGCGCGGGTCCGGATCGTCCCCTGGGACGTCGCTGCCCTCGGCCTCGACGCCGATCGGGCGATCGCCCTGCTCGCGGCCAGCGGGGGGCGGACGACCCTGGCGCCCGGGCTCGTCGTCGGGAAAGACCTGGAGTTCTGGTCGGCGGCCTTGCGGTTCGCGGGGTCGCTGGTGGCGCGTCAGCAGTTCCTCCCCGGCCTGGAGCGGGTCGACGGGACGTACCGGGCGCGTTGGGAGCCGGTCCTCAACGGGACCGATCCCCAGCGGCTCGCGCAGCTTGCGAAGGCGTTGCCGTCGTCGGGACGTGCCCTGACCCGGCAGGCGTTCGGCGGCCCCCCCACGACCTCGTCCTCGGTCGTGGTCTCGGAGTTCGTCGGCGCGATCGTCGACCACCTCGTCCGCAGCTCAACTCAGCCGGCCGCACCCGAGCGGTCGGTCAGTCGTGCGACGACGAAGCGAACGCCGGTCGCGACGACGAAGCGGAAGCCGGTCGCGAAGAAGGCGAGCCGCTTCGACAGCCTCGACGACTACTGGGTCCACGCCCTGGAGTCGCCGAACGGCCTGATGGACGGCGACGACGCGGGGCTCGCCCGCCTCGAGGACCAGGTCCGCCGTTGGCGTCGGCCGATCGCGGTCGCGGCGGACGCCCCTTTCCGGCTAGGCTTCCGGCTCGAAGAGCCCGAGGTCGACGAAGGGAGCCCGAGCAAGGGGGCCGGGCGGAGCCTCTGGACGGTCCGCTACCTGCTCCAGGCGGCCGACGACCCGAGCCTCCTCGTGCCGGTGGCCGAGGCCTGGAACCCCCGGGGGCGGCAGGCGCAGTTGCTCCAGCGAGGCGGCTTCCAGCCTCGCGAGGCGCTCCTGGCGGGCCTCGGTGAGGCGGCGAAGATCAGCCCGAAGGTCGAGGAGAGCCTGAAGTCGCCTACCCCAGGCGGGTTCATGCTCGACGCGACCGAGGCCCACGACTTCCTCACCCAGAAGGCCTGGCTGCTCGAACAGGCGGGGTTCGCCGTCTTCCTCCCCGCGTGGTGGTCCCGCAAGGGGACCAAGCTCAAGCTCGCGGCCCGGGCGGTGGTCAAGACCCCGAAGCTCGGCAGCTCGAGCGGCCTCACCCTCGACAAGATCCTGAACTTCGAGTGGAAGGTCGCCCTCGGCGACGAGACGCTCACCCAGTCCGAGCTGCGGGCGTTGGCCAAGCAGAAGTCGCCGCTCGTCCGCGTCCGAGGGCAGTGGGTCCAGCTCAGCGCCGAGGAGATCCAGGCGGCGCTCGACTTCTGGAAGAAGAAGGGCGAGGCGGTCCCGGCGCGGCAGGCGGTCCGGATGGCGCTCGGGATGGGCCAGGCCCCGGGGGGCCTCGCGTTCGAGGGGGTCGAGGCGACCGGCTGGTTCGCCGACCTCCTGGGGCAGCTCCAGGGACGTGACGGGTTCGAGATGCTCGAGGCCCCCAAGGACTTCCGAGGGGCCCTAAGGCCCTACCAGGCCCGCGGATACTCCTGGCTCGGGTTCCTCAAGCGTTGGGGCTTCGGCGCCTGCCTCGCCGACGACATGGGGTTAGGAAAGACCGTGCAGACCCTCGCGATGGTCGAGCGGGACTGGGAGGAGGCCGATCCCAACAAACGACGCCCGACACTCCTGGTCTGCCCGATGTCCGTCGTCGGCAACTGGCAGAAGGAGGCGGCGAAGTTCACCCCCCACCTCCCCGTGATGGTCCACCACGGCCAGGCCCGGATGAAGGGGGCCGCGTTCAAGAAGGAGGCGATGAAGCACGCGCTGGTGCTCTCGAGCTTCGCGCTCCTGCACCGCGACTTCGACCTCCTCGACGCCGTCCCCTGGTCGGGCGTCATCCTCGACGAGGCGCAGAACATCAAGAACCCGGAGACCAAGCAGTCGAAGGCGGCGCGGGCCCTGGCGGCCGACTACCGGGTCGCGCTGACCGGGACGCCCGTGGAGAACCACGTGGGCGACCTCTGGTCGATCATGGAGTTCCTGAACCCGGGGCACCTCGGCACCCAGGCCGAGTTCAAGCGGAGCTTCCACATCCCGATCCAGGTGAATCGCGACCCCGAGGCCGCCCGGCAGCTCCAGCGCCTCTCGGGCCCGTTCATCCTCCGCCGCCTCAAGACCGACAAGTCGATCATCGCCGACCTCCCCGACAAGCAGGAGATGAAGGTCTACTGCACCCTGACCAAGGAGCAGGCCTCGCTCTACGAGGCCGTCGTCGAGCAGGCCTCGGAGGACCTCGAAACCTCCGAGGGCATCAAGAAGAAGGGGGTCGTCCTCGCAACGCTCTCGAAGCTCAAACAAGTCTGCAACCATCCCGCCCAGTTCCTCGGCGACAACTCGGCGATCCCCGGCCGCTCGGGCAAGCTCGCGCGCCTGACCGAGATGCTCGACGAGGCCCTCTCCGCGGGGGACCGTGCCCTCGTCTTCTCGCAGTTCTCCGAGATGGGCGAGATCCTCCGCCGGCACCTCCAGGAGACCTTCGGGCGCGAGGTCCTCTTCCTCCACGGCGGGACCTCCAAGAAGCAACGCGACGTCATGGTCGAGCGGTTCCAGGACCCCGGCGACGACGCGCCCCCGATCTTCGTCCTCTCGCTGAAGGCGGGCGGCACCGGCCTGAACCTGACCCGGGCGAACCACGTTTTTCACTTCGACCGCTGGTGGAACCCGGCCGTCGAGAACCAGGCGACCGACCGCGCCTTCCGAATCGGCCAGGCCCGCAACGTCCAGGTCCACAAGTTCCTCTGCGTCGGCACCCTCGAAGAGAAGATCGACGAGATGATCGAGACCAAGCAGGAGGTCGCCGGGTCCGTCGTCGGCACCGGCGAGGACTGGCTCACCAAGCTCTCCACGGCCGAGCTCAAAGACCTGTTCAAGCTCCGACGCGAGGCCCTCGGGGAATGA
PROTEIN sequence
Length: 1062
MIILHGAFFEGRLVLWGEASKEPSGRRPKSARAKGHAAEAHPFDAGASAMSDALSGALPEFSAHPGEFEGRVIWLPSTDSGPVASSPLIAEPPGSGARVRIVPWDVAALGLDADRAIALLAASGGRTTLAPGLVVGKDLEFWSAALRFAGSLVARQQFLPGLERVDGTYRARWEPVLNGTDPQRLAQLAKALPSSGRALTRQAFGGPPTTSSSVVVSEFVGAIVDHLVRSSTQPAAPERSVSRATTKRTPVATTKRKPVAKKASRFDSLDDYWVHALESPNGLMDGDDAGLARLEDQVRRWRRPIAVAADAPFRLGFRLEEPEVDEGSPSKGAGRSLWTVRYLLQAADDPSLLVPVAEAWNPRGRQAQLLQRGGFQPREALLAGLGEAAKISPKVEESLKSPTPGGFMLDATEAHDFLTQKAWLLEQAGFAVFLPAWWSRKGTKLKLAARAVVKTPKLGSSSGLTLDKILNFEWKVALGDETLTQSELRALAKQKSPLVRVRGQWVQLSAEEIQAALDFWKKKGEAVPARQAVRMALGMGQAPGGLAFEGVEATGWFADLLGQLQGRDGFEMLEAPKDFRGALRPYQARGYSWLGFLKRWGFGACLADDMGLGKTVQTLAMVERDWEEADPNKRRPTLLVCPMSVVGNWQKEAAKFTPHLPVMVHHGQARMKGAAFKKEAMKHALVLSSFALLHRDFDLLDAVPWSGVILDEAQNIKNPETKQSKAARALAADYRVALTGTPVENHVGDLWSIMEFLNPGHLGTQAEFKRSFHIPIQVNRDPEAARQLQRLSGPFILRRLKTDKSIIADLPDKQEMKVYCTLTKEQASLYEAVVEQASEDLETSEGIKKKGVVLATLSKLKQVCNHPAQFLGDNSAIPGRSGKLARLTEMLDEALSAGDRALVFSQFSEMGEILRRHLQETFGREVLFLHGGTSKKQRDVMVERFQDPGDDAPPIFVLSLKAGGTGLNLTRANHVFHFDRWWNPAVENQATDRAFRIGQARNVQVHKFLCVGTLEEKIDEMIETKQEVAGSVVGTGEDWLTKLSTAELKDLFKLRREALGE*