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berkeley_reactor_200306_planktonic_scaffold_68210_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 26799..29417

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDR3_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 635.0
  • Bit_score: 335
  • Evalue 8.50e-89
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 635.0
  • Bit_score: 335
  • Evalue 2.40e-89
Tax=RBG_13_Planctomycetes_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 582.0
  • Bit_score: 365
  • Evalue 1.10e-97

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Taxonomy

RBG_13_Planctomycetes_62_9_curated → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2619
ATGGCCAGCGGACAGAGCGGAGCCGTCAGTCGGGAGCTCGACCGGATTTTTCAGCGCGGGACCGTCGCATGCCTGTCCGAGTCCCAGTTGCTCGGTCGGTTCGTCGCGCGGGGCGATGAAGCGGCCTTCGAGGCGTTGCTGACGCGCCACGGGCCGATGGTCCTGGGCGTCTGCCGACGCATCCTCGGCGATCCGAACGATGCGGACGACGCGTTCCAGGCCACGTTCCTGATCCTGGTCCGCAAGGCGGGGGCGTTGCGCGACCCCGATCAACTGGGCGCTTGGCTGTATGGTGTCGCGTTCAAGGTCGCCGCGAAGGCCCGGTCCGATTCCGCGAGGCGCCGGGACCGAGAGCGTCGGGAGGTCCGAACGGAGGCTTCGGAAGAGGGCTCGTCACTGGAACGGACGGATCTGCGCGGGATTCTCGACGAGGAGTTGAATCGTCTTCCCGAGAAGTATCGCCGACCGATCATCCTTTGCTACCTGGAAGGACAGTCCCACGAAGAGGCCGCCCGCCGGCTTCGATGCACGACGGGCATGCTCCGCGGCCGGCTCGACCGGGGACGCGAGAAGCTCCGCACACGGCTGGGCCGCCGGGGTCTGGCGCCGGCGGCGGTCCTCTCGGGCTTTGCGCTGGCTGGCGAGGCCGTTGCTGTCACGGTACCGGATGCCCTCAGGGAATCGACGCTGTCTGTCGCCGTCCAGTCTCTCAACGGTGGGGCTGCGGCTGCGGCGATCTCAGCCTCGGCCCACTCTCTGGCCCAGCGGGTGCTCCGATCGGCCTTCCTGTCCAAGCTGACGCTCGCGGCCATGCTCCTGATGCCGGGGGCCGCCTTGCTGGCGGTCATGCCCCCGGGGGGCGCCGACAAGGCCGTCCCGCAAGTCGACCGTCTCGAGCCGCGGCTGGCCGGAAACCCCAAGGTCATCCGGGACGCGAACGGCATCACGCTCACGGGCCGGGTCCTCAACAGGGAAGGCCGGGCGATCCTCGGCGCCCGAGTCGGGCTAGGGGCGAATCGCCAGGCGGCAGCTACCCCCGAGACGGTGACCGACGTCGACGGCCTGTTCACCTTCGACGATGTGCCCGCGGGGCCGGTCATTTTCACCGTCCAGGCGACCGGCCATGCCCCCGAGTTGAGGACGCTGGACGTCGTCAAGGAGACGCAACCCGTCGAATTCCGCCTCGGGCCCGGGCGGTCGATCGGCGGCCGGATCACCGACCTCGCGGGGAAGCCCATCGCCGGGGCCCCCATCTCCGCCGGGCCCTGGCGCGGGCAGAACACGCTCGTGTGGCGCTCCGTGACGGATTCGGACGGCCGATACCGCTGGGACGATGCGCCGGAGGACGACGTGCTGATCGACCTCGGTACGATGGGATACACGTCGAAGCGGTTCCTGTCCTTCCCGCCCGGGAAGGACGCGAGGGACCTGACGATGCCCCGTCCGAGATATGTTCGGGGTTCGGTCACCGACGCGGTGACCGGCAAGCCGGTCGAGCGGTTCACGGTGCTGACTGGCCACGGGAATCCCGGCGGAAGCGACCTCGAATGGGAATACCCACTGGCGGTGCCGGGCTCGGCGGGACGATACGAGGCCAAGCTGGGGGCCGAGTATCGGAGCTTCGACCGCTTCGTCCGGATCGAGGCCGACGGCTATCTCCCCGAACGATCGCGGGCCCTGGGGGAGAGTGAGGCGGAGTGGGACCGGACCTTCGACGTCAAGCTAAGGCCGGGCGACGCGGCGATCACCGGCGTCGTCCGGCTCCCCGACGGCTCGCCGTTGGCTGGGGCCGAAGTCGTGCTCCTGACCTCCCTGACGCCGATCACCGACGGCCGGCTCCCCGCCCCCTTGCCGGGCCGGCTTGCGAAGACCGGGCCGGATGGACGCTTCCGATTCCCGTCGTCCGACACACCCTTCACGGTCGTCGTGCTCCACGACAAGGGCTTCGCGGAGCGCACCTCGGAGGAATTCGCGGGCGGCTCGGACTTGACGGTCGAGCCCTGGGGCCGCATCGAGGGGACGTACAGCGTCGGTACCAAGTTCGAGGCGGGCGAGACGCTGGCCCTCGTGCGGAGCCAGACGGGCCGCTCCAGGTCCCTCACCTCCTTCAATGGCTATGCCGCCGTGAATGCCGATGGTCACTTTCGCTTCGAGCGGGTCCCTCGCGGGGCCGTTGCCGTCGCACAGCAGGTGAAGAAAGGCCCGTTCACGTCGCTGTACCCCCTGACGGATCCTCTCGAGGTGAGGCCGGGGGAAACCGCGAAGGTGGCGATCGGCGGCGAGGGGCGGCCGGTCGTCGGCCGGTTCGACATCCCGGCTTCGATCGCGGGTCAGGTCGACTGGACATGGAGCGAGATCCTCCTCGTCCCGGTCCGGGATCGAAAATTGGTCCATGTCGGCAAGCCTACGGTTGCAGGGGGATTCAAGATCGAGGACGTCCCGTCTGGCGCGTACGAGCTGATCGTCACGATCAAGAAAACACCTTCGGATTCGGCCAATGGTTTCTCGGATCAACCGATCGCAGGGGGACGTCGCAAGATCGATGTCGCGGAGATCCCCGGGGGTAGGAGCGATGAGCCGCTCGATGTGGGCACGGTCACGCTCTCGGCGGAGAAGTAG
PROTEIN sequence
Length: 873
MASGQSGAVSRELDRIFQRGTVACLSESQLLGRFVARGDEAAFEALLTRHGPMVLGVCRRILGDPNDADDAFQATFLILVRKAGALRDPDQLGAWLYGVAFKVAAKARSDSARRRDRERREVRTEASEEGSSLERTDLRGILDEELNRLPEKYRRPIILCYLEGQSHEEAARRLRCTTGMLRGRLDRGREKLRTRLGRRGLAPAAVLSGFALAGEAVAVTVPDALRESTLSVAVQSLNGGAAAAAISASAHSLAQRVLRSAFLSKLTLAAMLLMPGAALLAVMPPGGADKAVPQVDRLEPRLAGNPKVIRDANGITLTGRVLNREGRAILGARVGLGANRQAAATPETVTDVDGLFTFDDVPAGPVIFTVQATGHAPELRTLDVVKETQPVEFRLGPGRSIGGRITDLAGKPIAGAPISAGPWRGQNTLVWRSVTDSDGRYRWDDAPEDDVLIDLGTMGYTSKRFLSFPPGKDARDLTMPRPRYVRGSVTDAVTGKPVERFTVLTGHGNPGGSDLEWEYPLAVPGSAGRYEAKLGAEYRSFDRFVRIEADGYLPERSRALGESEAEWDRTFDVKLRPGDAAITGVVRLPDGSPLAGAEVVLLTSLTPITDGRLPAPLPGRLAKTGPDGRFRFPSSDTPFTVVVLHDKGFAERTSEEFAGGSDLTVEPWGRIEGTYSVGTKFEAGETLALVRSQTGRSRSLTSFNGYAAVNADGHFRFERVPRGAVAVAQQVKKGPFTSLYPLTDPLEVRPGETAKVAIGGEGRPVVGRFDIPASIAGQVDWTWSEILLVPVRDRKLVHVGKPTVAGGFKIEDVPSGAYELIVTIKKTPSDSANGFSDQPIAGGRRKIDVAEIPGGRSDEPLDVGTVTLSAEK*